Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: unix • reset
or   Classic search
<prev • 116 results • page 1 of 4 • next >
1
vote
2
answers
79
views
2
answers
Advice on Blast output
format unix blast written 6 days ago by stacy734 • 30
5
votes
1
answer
126
views
5 follow
1
answer
Loop over .sai files coupled with .fastq.gz
chip-seq unix written 27 days ago by Bnf83 • 130 • updated 27 days ago by arup • 850
0
votes
2
answers
942
views
2
answers
Giving options to Command line Clustalw
clustalw unix written 18 months ago by Jacob • 10 • updated 4 weeks ago by Mirko • 0
5
votes
1
answer
307
views
1
answer
How to load data into R from an external hard drive?
R load unix rstudio written 8 weeks ago by M.O.L.S • 0 • updated 8 weeks ago by zx8754 ♦ 6.5k
2
votes
1
answer
188
views
6 follow
1
answer
Getting unusual characters while generating output files in a bash script
sh bash unix linux written 10 weeks ago by S AR • 50
0
votes
1
answer
177
views
1
answer
Splitting each row of a correlation matrix into individual files
gene unix split commands written 11 weeks ago by priyankaraina10 • 10 • updated 11 weeks ago by finswimmer ♦ 9.9k
0
votes
1
answer
281
views
1
answer
How to identify which SNPs in my dataset are genome wide significant
R unix manhattan plot written 3 months ago by sean.oscineir2 • 0 • updated 3 months ago by Johan Zicola • 40
3
votes
1
answer
219
views
1
answer
Replace between character and white space using unix sed
replace sed unix written 4 months ago by dllopezr • 40 • updated 4 months ago by Kevin Blighe ♦ 37k
12
votes
1
answer
285
views
1
answer
Add text in somewhere middle of line using information from the same line in file.
sed unix awk written 4 months ago by bk11 • 30 • updated 4 months ago by jrj.healey ♦ 10k
15
votes
1
answer
288
views
1
answer
Debugging a sed script to extract values from rows in .txt file
sed unix regex written 4 months ago by kristina.mahan • 30
1
vote
0
answers
156
views
0
answers
where to keep scripts for new software
$path install unix written 4 months ago by DataFanatic • 120
1
vote
2
answers
167
views
2
answers
Calculating average using information from three different columns of a file.
R unix python written 4 months ago by bk11 • 30 • updated 4 months ago by zx8754 ♦ 6.5k
6
votes
1
answer
299
views
5 follow
1
answer
Finding out if certain SNP positions fall into certain gene regions
gene region snps unix R written 4 months ago by SGMS • 50 • updated 4 months ago by Alex Reynolds ♦ 27k
6
votes
5
answers
434
views
5 follow
5
answers
Extract start coordinate from read 1 and end coordinate from read 2 of paired end reads.
bedtools unix written 5 months ago by rjobmc • 0 • updated 5 months ago by finswimmer ♦ 9.9k
1
vote
0
answers
246
views
0
answers
Subset reads from RNAseq .bam file
unix rna-seq written 6 months ago by fabio.demartino2 • 0
0
votes
0
answers
177
views
0
answers
Buffer Overflow with GSNAP
alignment unix rna-seq written 6 months ago by noahaus • 10 • updated 6 months ago by genomax ♦ 62k
14
votes
5
answers
452
views
7 follow
5
answers
Removing N's from NextSeq reads
sequence unix rna-seq cel-seq written 6 months ago by exin • 50 • updated 6 months ago by cpad0112 ♦ 11k
13
votes
1
answer
332
views
8 follow
1
answer
No alignment, only header in sam file
samtools unix rna-seq written 7 months ago by ss • 0 • updated 7 months ago by ATpoint ♦ 13k
1
vote
0
answers
599
views
0
answers
Job: Computer scientist or bioinformatician to join the bioinformatics unit of the European Institute of Oncology (IEO - Milan)
hpc ngs unix web job written 7 months ago by Arnaud Ceol • 840
9
votes
2
answers
280
views
2
answers
Obtain sequences that did not appear in your fasta file
genome perl ngs unix bash written 7 months ago by sicat.paolo20 • 30 • updated 7 months ago by Pierre Lindenbaum ♦ 116k
15
votes
2
answers
1.3k
views
7 follow
2
answers
A Question On Doing Substitution By Using Bash
unix sam written 7.5 years ago by Yunfei Li • 280 • updated 8 months ago by Biostar ♦♦ 20
2
votes
2
answers
439
views
2
answers
Convert genotype probabilities (0-1) into genotypes (0,1,2)
R unix snp written 8 months ago by lakemonster • 0 • updated 8 months ago by zx8754 ♦ 6.5k
0
votes
3
answers
1.3k
views
3
answers
Changing names of Fasta headers
fasta sequence sed unix bash loop written 11 months ago by tpaisie • 70 • updated 8 months ago by h.mon ♦ 23k
2
votes
0
answers
270
views
0
answers
samtools merge iterate through multiple chromosomes and generates pairs
genome samtools unix whole genome sequencing written 9 months ago by s1661753 • 0 • updated 9 months ago by RamRS ♦ 20k
0
votes
1
answer
652
views
1
answer
Adjust ulimit open file handle limit on Mac OS X Sierra for GATK
gatk gatk3 macosx unix ulimit written 9 months ago by gaelgarcia05 • 180 • updated 9 months ago by Alex Reynolds ♦ 27k
0
votes
0
answers
303
views
0
answers
Job: Postdoctoral Fellow (Genome Assembly)
java job c/c++ perl unix linux written 9 months ago by Recruit • 220
1
vote
1
answer
376
views
1
answer
Removing illegal Characters from an Alignment file for RaxML
python unix written 10 months ago by apulunuj • 0 • updated 10 months ago by Alex Reynolds ♦ 27k
0
votes
0
answers
295
views
0
answers
News: RAD-seq data analysis course in Berlin
rad-seq bioinformatics news stacks unix written 10 months ago by carlopecoraro2 • 840
1
vote
2
answers
545
views
5 follow
2
answers
Replacing nth character in all lines help
bioinformatics sequence unix linux python written 10 months ago by austinjyoder • 0 • updated 10 months ago by cpad0112 ♦ 11k
0
votes
2
answers
362
views
5 follow
2
answers
Extracting counts of reads into a matrix
reads grep counts unix written 11 months ago by rmash • 0 • updated 11 months ago by cpad0112 ♦ 11k
<prev • 116 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • Genomic Island, just now
  • UK, just now
  • Barcelona, 1 minute ago
  • United Kingdom, 2 minutes ago
  • Limoges, CBRS, France, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2418 users visited in the last hour