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13
votes
3
answers
1.3k
views
5 follow
3
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Unix or Linux which is better choice for genomic analysis?
genomic next-gen analysis unix linux written 2.4 years ago by Rafay Khan • 720 • updated 12 days ago by chromosomegun • 260
7
votes
0
answers
576
views
0
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News: Physalia-Course: Introduction to Linux and workflows for biologists-2 spots left (Berlin)
assembly news next-gen unix alignment written 3 months ago by carlo.pecoraro2 • 310
0
votes
0
answers
82
views
0
answers
GFF-Ex Issues in extracting intergenic regions
perl bioinformatics gff-ex unix R written 17 days ago by Diesel • 0
2
votes
1
answer
125
views
1
answer
danpos2 error messages
mac python danpos2 rpy2 unix written 22 days ago by ChIP-Tease • 30
5
votes
3
answers
206
views
5 follow
3
answers
Rearranging order of descriptors in fasta file header
fasta unix dna written 6 weeks ago by m.rhodes • 10 • updated 6 weeks ago by jrj.healey • 1.6k
2
votes
0
answers
160
views
0
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Blog: Beware the differences between /bin/sh and /bin/bash
blog unix shell scripts written 6 weeks ago by Ram ♦ 11k
0
votes
0
answers
131
views
0
answers
counting sequences with fuzzy uniq (with mismatches)
cli unix written 9 weeks ago by igor • 4.3k
7
votes
4
answers
213
views
7 follow
4
answers
how to select with unix a column by the column name in a txt files
unix written 9 weeks ago by AQ7 • 0 • updated 9 weeks ago by shenwei356 • 3.1k
10
votes
1
answer
267
views
1
answer
Simple amino acid polymorphism count
alignment unix shell written 3 months ago by stutterdust • 0 • updated 11 weeks ago by st.ph.n • 860
1
vote
0
answers
173
views
0
answers
Add a column of "description of proteins" against the accession number in tab delimited file.
python biopython unix written 12 weeks ago by adeel.maliks20 • 0
6
votes
6
answers
257
views
9 follow
6
answers
Use egrep on only one column
grep unix written 12 weeks ago by ISB • 0 • updated 12 weeks ago by Rohit • 1.1k
0
votes
0
answers
187
views
0
answers
Job: Postdoctoral Fellow in Quantitative Models for Predicting Antibiotic Resistance
perl phyton unix job written 12 weeks ago by Recruit • 180 • updated 12 weeks ago by Michael Dondrup ♦ 42k
0
votes
0
answers
119
views
0
answers
ERROR with OMIM API: Can't include more than one parameter via curl
api curl unix terminal omim written 3 months ago by jorgeduran • 0
2
votes
0
answers
204
views
0
answers
How to convert a database from protein to nucleotide
bioinformatics blastn blastx unix blast written 3 months ago by AJTrunkskun94 • 0 • updated 3 months ago by WouterDeCoster ♦ 19k
6
votes
0
answers
313
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5 follow
0
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Job: Senior Bioinformatician (Jones Group, Hinxton, Cambridge UK)
genome perl computer science unix job written 3 months ago by Recruit • 180
3
votes
2
answers
202
views
2
answers
Extracting pairwise alignment info
pairwise alignement grep sed unix awk written 4 months ago by Kevin D • 0 • updated 4 months ago by 5heikki ♦ 6.4k
11
votes
6
answers
5.2k
views
11 follow
6
answers
Remove Redundant Sequences Fasta
perl fasta sequence unix awk written 3.7 years ago by empyrean999 • 140 • updated 4 months ago by Eslam Samir • 90
2
votes
1
answer
442
views
1
answer
install bioawk in unix system
bioawk unix written 5 months ago by newbiebio • 60 • updated 5 months ago by cmdcolin • 620
9
votes
4
answers
495
views
4
answers
Script to sort bam file not working
bam samtools unix blast sort written 7 months ago by emth4657 • 10 • updated 7 months ago by Santosh Anand • 2.3k
2
votes
1
answer
400
views
1
answer
Using multiple local databases for blastp on unix
blast database unix blastp bioinformatics written 9 months ago by peachila • 0 • updated 7 months ago by Asaf ♦ 4.1k
3
votes
2
answers
433
views
2
answers
Python: extract barcodes and vector sequence from fastq reads, add barcodes to header
python next-gen unix written 8 months ago by tinker • 0 • updated 8 months ago by chen • 860
1
vote
1
answer
334
views
1
answer
Reverse order of Cuffdiff samples?
cufflinks cuffdiff unix rna-seq sequencing written 9 months ago by pat.longjump • 0 • updated 9 months ago by Mike • 620
25
votes
4
answers
9.6k
views
21 follow
4
answers
Filtering Fastq Sequences Based On Lengths
perl unix awk written 4.3 years ago by empyrean999 • 140 • updated 10 months ago by etienne.rifa • 10
0
votes
2
answers
697
views
2
answers
Finding SNPs per gene for SNP Density in UNIX
varscan grep unix snp written 19 months ago by crawlthrutacos • 0 • updated 10 months ago by Alex Reynolds ♦ 19k
0
votes
1
answer
348
views
1
answer
Problems in dividing genome to non-overlapping bins and count genes
genome R unix gene written 10 months ago by milk841103 • 0 • updated 10 months ago by Ram ♦ 11k
2
votes
1
answer
368
views
1
answer
modifying fasta header
perl fasta unix written 11 months ago by empyrean999 • 140 • updated 11 months ago by 5heikki ♦ 6.4k
2
votes
0
answers
380
views
0
answers
vlookup type array matching command for BED analysis
chip-seq unix written 12 months ago by maharshichakravortee • 10
3
votes
1
answer
364
views
1
answer
Field search in BED
bed chip-seq unix written 12 months ago by maharshichakravortee • 10
1
vote
1
answer
311
views
1
answer
makeblastdb of refseq_genomic for sequences with subspecies
python unix blast written 13 months ago by Spencer D. • 0 • updated 13 months ago by piet • 1.3k
3
votes
1
answer
463
views
1
answer
NCBI edirect "command not found"
ncbi edirect unix commandline entrez written 14 months ago by mmats010 • 40 • updated 14 months ago by genomax ♦ 29k
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