Showing: utrreset
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Mapping aligned reads to UTRs
cds alignment utr rna-seq written 4 weeks ago by jpcchoy0 • updated 4 weeks ago by Ace40
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121
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Bulk Download all CDS and UTRs of known genes from ENSEMBL
cds utr ensembl written 7 weeks ago by Aishwarya Kulkarni60 • updated 7 weeks ago by ATpoint19k
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164
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Find the 3' utrs, 5'utrs and their counts from bam files
bedtools bed bam utr ucsc written 6 months ago by ilovesuperheroes19930 • updated 6 months ago by Gautier Richard280
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6 follow
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Multiple Sequence Alignment Of 3' Utr
alignment utr multiple written 9.3 years ago by Ria20 • updated 10 months ago by RamRS22k
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1
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Recommended Tools For 3'UTR APA Detection From Rna-Seq Data?
R tools utr rna-seq polyadenylation written 23 months ago by gandrescabrera80 • updated 23 months ago by i.sudbery5.0k
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Get one maximum UTR per gene
biomart 3' utr utr ucsc written 24 months ago by max0 • updated 24 months ago by Alex Reynolds28k
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Finding UTR regions in the RNA sequencing data from a non-model organism
non-model organism utr rna-seq written 2.8 years ago by seta1.2k • updated 2.8 years ago by EVR540
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1
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infer 3' and 5' UTR from gff3 file
genome gff3 next-gen utr written 3.0 years ago by Chris30 • updated 2.9 years ago by Daniel Standage3.9k
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16 follow
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Easy Way To Get 3' Utr Lengths Of A List Of Genes
utr written 8.5 years ago by Paul750 • updated 3.0 years ago by marcosmorgan90
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Collecting 3' UTR and neighboring exonic sequence from GENCODE GTF files
gtf utr gencode written 3.3 years ago by mdwain.uw0 • updated 3.3 years ago by Emily_Ensembl18k
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9 follow
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How To Get The 3' Utr Given Geneid And Transcriptid In Ensembl Using Python?
ensembl biomart utr api written 8.3 years ago by Sam70 • updated 3.4 years ago by alex.rubinsteyn130
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2
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Is there any way to extract longest ORF from blastx output?
sequence cds alignment utr blast written 3.9 years ago by sohra40 • updated 3.8 years ago by 5heikki8.4k
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1
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Finding coding and UTR regions for a gene list
alignment coding utr sequencing written 3.9 years ago by seta1.2k • updated 3.9 years ago by Pierre Lindenbaum121k
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How to get distingushable CDS and UTR sequences of gene from biomart?
biomart sequence coding utr written 3.9 years ago by sohra40 • updated 3.9 years ago by Devon Ryan91k
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1
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UTR visualization of CLIP seq data
visulaization utr browser written 4.2 years ago by kanwarjag970 • updated 4.1 years ago by Sukhdeep Singh9.8k
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biomaRt: Extracting data for a particular isoform (R/bioconductor)
biomart utr extract bioconductor written 4.2 years ago by bsmith030465150 • updated 4.1 years ago by Biostar ♦♦ 20
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5 follow
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Mirna Target Prediction
utr mirna target written 7.2 years ago by Janake160 • updated 4.4 years ago by julierey520
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Collection of 5' mRNA ends from human transcriptome
5' dataset utr rna written 4.4 years ago by surka0 • updated 4.4 years ago by Devon Ryan91k
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UTR region misassembly ?
assembly utr rna-seq misassembly transcriptome written 4.9 years ago by ascendo.u10 • updated 4.8 years ago by Biostar ♦♦ 20
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