Showing: variant callingreset
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How to make variant calling run faster?
variant calling gatk mutect2 written 4 days ago by steve890 • updated 4 days ago by Brian Bushnell14k
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DNA sequence of genes from vcf file
vcf variant calling bcftools gene ensembl written 11 weeks ago by bioinfo890 • updated 4 days ago by songbaoxing1680
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Detecting gene insertions with DiscoSNP
variant calling discosnp written 7 weeks ago by laeb60 • updated 19 days ago by Biostar ♦♦ 20
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What does ALT 0 mean in a VCF?
variant calling sequence alignment written 5 weeks ago by emyli0 • updated 5 weeks ago by finswimmer540
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Forum: User Friendly VCF Filtering Tools
variant calling vcf forum filtering written 16 months ago by andrew.j.skelton733.9k • updated 11 weeks ago by steven.n.hart20
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Retain file names as sample names while making pileup
vcf variant calling bcftools samtools gene written 12 weeks ago by bioinfo890 • updated 12 weeks ago by WouterDeCoster22k
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snpEff inappropriate interpretation of variants?
software error variant calling alignment rna-seq written 12 weeks ago by moushengxu260 • updated 12 weeks ago by rbagnall1.1k
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how to calling variants in RNAseq data from multiple samples?
variant calling gatk vc rna-seq written 3 months ago by Lila M 370 • updated 3 months ago by Samuel Brady230
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SNPs Calling Tools
variant calling alignment snp rna-seq written 7 months ago by dd.catania0 • updated 3 months ago by colindaven340
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Extracting Codons from a SNP alignment
variant calling next-gen phylogenetics snp written 3 months ago by tpaisie60 • updated 3 months ago by rbagnall1.1k
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Pindel and GATK AD Concordance
variant calling gatk allele depth pindel written 4 months ago by jsneaththompson0 • updated 4 months ago by Dan Gaston6.8k
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Filter/Annotate VCF with dbSNP during variant calling workflow
variant calling vcf ngs bam dbsnp written 2.3 years ago by alons230 • updated 5 months ago by Biostar ♦♦ 20
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samtools variant calling workflow
variant calling realignment samtools written 6 months ago by mirza80 • updated 6 months ago by Santosh Anand3.0k
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