Showing: variant callingreset
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Hard filtering results of vcf file for multiple samps
variant calling gatk hard filtering written 6 weeks ago by seta1.0k • updated 6 weeks ago by finswimmer5.4k
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Extracting Variants from large set of variants
variant calling vcf wgs data written 8 weeks ago by bioinfo3550 • updated 8 weeks ago by ammar.husami0
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Find variants supported by at least 20 reads freebayes
variant calling freebayes written 3 months ago by kspata30 • updated 3 months ago by finswimmer5.4k
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How do variant callers get genotype info?
variant calling indel snp phasing written 3 months ago by afzm20 • updated 3 months ago by Jeremy Leipzig17k
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samtools mpileup output only contains vcf header
variant calling samtools mpileup written 4 months ago by s10206012510 • updated 4 months ago by swbarnes24.0k
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VCF file manipulation for extracting the required information
variant calling vcf file genome sequencing written 5 months ago by seta1.0k • updated 5 months ago by cpad01128.9k
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Base Recabiliration Filters out 88% of the reads
variant calling rna-seq written 7 months ago by Sharon340 • updated 5 months ago by Biostar ♦♦ 20
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