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Computational resources for WGS variant calling
variant calling wgs bwakit openstack gatk written 11 weeks ago by alesssia560 • updated 5 weeks ago by Jeremy Leipzig19k
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Does it make sense to repeat the assembly step in variant calling?
variant calling written 12 months ago by ajuiwl30 • updated 8 weeks ago by Biostar ♦♦ 20
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Variant calling by using samtools and bcftools
variant calling samtools bcftools written 13 months ago by hasani.iut640 • updated 9 weeks ago by Lakshman Teja40
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How to effectively use GATK haplotype caller with -L breaking up BAM files
variant calling gatk written 3 months ago by mgdesaix10 • updated 3 months ago by rbagnall1.5k
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soft-clipping during alignment and variant calling query
variant calling bwa-mem alignment gatk written 4 months ago by prasundutta87360 • updated 3 months ago by Biostar ♦♦ 20
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Difference between variant calling and genotyping
variant calling genotyping written 5 months ago by Floydian_slip130 • updated 5 months ago by Charles Warden7.6k
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VarDict Amplicon-Aware Calling with barcoded seq data
variant calling next-gen molecular barcode written 2.2 years ago by jsneaththompson80 • updated 6 months ago by Biostar ♦♦ 20
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VarScan.v2.4.3 generating incomplete or partial VCF file
variant calling exomeseq snp varscan written 7 months ago by Sandeep250 • updated 7 months ago by 2nelly170
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Effect size in power analysis when dealing with Poisson based variant caller
variant calling written 7 months ago by CY460 • updated 7 months ago by markus.riester480
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