Showing: variant callingreset
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VarScan warning and exit after Invalid format for pileup at line 1
software error variant calling wes written 23 hours ago by n.tear0 • updated 23 hours ago by RamRS21k
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% of I averaged across each A sequenced
variant calling rna-seq written 4 weeks ago by cwilson0 • updated 4 weeks ago by zx87547.1k
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Does it make sense to repeat the assembly step in variant calling?
variant calling written 11 weeks ago by ajuiwl30 • updated 11 weeks ago by Devon Ryan89k
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Counting total variants
genome variant calling next-gen written 12 weeks ago by Hadi M10 • updated 12 weeks ago by finswimmer11k
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vcf calculation of allele counts and allele number
variant calling written 3 months ago by susan.klein0 • updated 3 months ago by finswimmer11k
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Variant calling by using samtools and bcftools
variant calling samtools bcftools written 3 months ago by hasani.iut640 • updated 3 months ago by ATpoint15k
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some good practices doubts
gene variant calling alignment written 17 months ago by prasundutta87330 • updated 3 months ago by Biostar ♦♦ 20
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VCF file manipulation for extracting the required information
variant calling vcf genome sequencing written 12 months ago by seta1.1k • updated 4 months ago by zx87547.1k
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Consensus VCF file from several variant callers
vcf variant calling freebayes gatk written 4 months ago by ajuiwl30 • updated 4 months ago by Pierre Lindenbaum119k
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Merging population vcf files without gvcf
variant calling genome next-gen written 4 months ago by Myo Naung 10 • updated 4 months ago by WouterDeCoster38k
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Somatic variant caller
variant calling somatic next-gen written 2.1 years ago by CY310 • updated 4 months ago by Biostar ♦♦ 20
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Warning in GATK Picard MarkDuplicates
variant calling gatk picard markduplicates written 4 months ago by Mehulsharma.25310 • updated 4 months ago by Pierre Lindenbaum119k
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