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<prev • 303 results • page 1 of 11 • next >
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Problems installing the new VCF File Visualization tool VIVA
vcf visualization viva variant julia written 7 days ago by gcooper1245 • 10
29
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3
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13k
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12 follow
3
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Recommendations For Python Vcf Parser/Writer?
vcf python variation variant written 7.9 years ago by Reece • 270 • updated 9 days ago by Dataman • 310
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75
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Detecting variants in mapped reads against 16S rRNA reference sequence
rrna variant prokka written 13 days ago by clapin • 0
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345
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15 follow
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Tutorial: Resources / databases for clinical interpretation of cancer variants
cancer interpretation tutorial variant annotation clinical written 5 weeks ago by Malachi Griffith ♦ 18k
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76
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ClinVar and HGVS variant (insertion) definition for protein sequence
hgvs protein clinvar variant insertion written 22 days ago by Yu • 110
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89
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Meaning of minus ("-") sign in frameshift protein variant nomenclature
annotation ngs variant nomenclature written 4 weeks ago by bhuwanhld18 • 0
2
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158
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Need recommendations of RNA-Seq somatic variant calling pipeline
somatic variant rna-seq written 6 weeks ago by Zhenyu Zhang • 260
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205
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Understanding the output of pileup2snp
variant samtools snp varscan written 3 months ago by e.rempel • 780 • updated 6 weeks ago by Biostar ♦♦ 20
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207
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Job: Variant Analyst-Genomics at UAB, Birmingham, Alabama
analyst genomics variant job exome disease written 7 weeks ago by cgds • 0
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1
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243
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1
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Methods for Doing Consensus Variant Calling between multiple callers
consensus wes calling variant dna written 3 months ago by djevanclark • 40
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1
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125
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1
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Positions of variant in certain depth
variant sam written 8 weeks ago by avichaireich • 0
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220
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why there is 0/0 genotyp in VCF file?
vcf gatk variant written 3 months ago by star • 190
12
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1
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2.5k
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7 follow
1
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Zygosity Of A Copy Number Variant
genome variant cnv written 7.8 years ago by Pascal • 1.5k • updated 4 months ago by Biostar ♦♦ 20
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242
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GATK SplitNCigarReads Error
gatk variant rna-seq written 4 months ago by BAGeno • 160
1
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2
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178
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uniprot variant classification DB retireve
variant vep uniprot ensembl written 4 months ago by cocchi.e89 • 30 • updated 4 months ago by Elisabeth Gasteiger • 1.7k
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1
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206
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1
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 4 months ago by cocchi.e89 • 30 • updated 4 months ago by Jean-Karim Heriche ♦ 21k
4
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202
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Why do I have more than 5000 variants when I used a 5K snp array?
vcf alignment variant plink snp written 4 months ago by rgooley • 0 • updated 4 months ago by genomax ♦ 74k
3
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265
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Question about annotation for duplication using annovar
annovar next-gen variant written 5 months ago by hns • 150 • updated 5 months ago by hns0410 • 10
13
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2
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1.8k
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8 follow
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 2.3 years ago by Lauren • 50 • updated 5 months ago by Shicheng Guo • 7.8k
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217
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VARIANT effect retrieving
indel variant effect snv written 8 months ago by cocchi.e89 • 30 • updated 6 months ago by Biostar ♦♦ 20
2
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2
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569
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2
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Read position bias (RPB and PV4) fields from samtools mpileup: how to get them?
rpb variant mpileup snp call written 18 months ago by Macspider • 3.0k • updated 6 months ago by al.bodrug • 50
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2.4k
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.0 years ago by Rlong • 340 • updated 6 months ago by isaacpei • 0
1
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1
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193
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1
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Variants in Exon or Intron
exon variant intron written 6 months ago by zakkaknadine • 10 • updated 6 months ago by shawn.w.foley • 1.1k
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275
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Is there any inheritance information source other than OMIM and free for commercial use?
gene dominant database variant recessive written 6 months ago by magnolia • 0
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1
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257
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1
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hom/het definition from Allelic Depth counts
ad count variant het hom written 6 months ago by cocchi.e89 • 30 • updated 6 months ago by Vitis • 2.3k
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1
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1.1k
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1
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GATK Panel Of Normals (PoN)
gatk beta calling variant written 12 months ago by Barry Digby • 220 • updated 6 months ago by esraesmeray1990 • 10
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1
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2.2k
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1
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Can Some One Explain These Gatk Unifiedgenotyper Commands And Difference In Terms Of Output Also
gatk ngs variant written 6.2 years ago by always_learning • 1000 • updated 7 months ago by Biostar ♦♦ 20
7
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1
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623
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1
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why A/T or C/G are ambiguous SNPs?
genome variant snp strand written 7 months ago by seta • 1.2k • updated 7 months ago by Emily_Ensembl ♦ 19k
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172
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Variant Calling between Microbial Populations
populations snp calling variant samtools written 7 months ago by gabriel.jabud • 20
4
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1
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342
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5 follow
1
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How to check the allele strand of variants?
variant written 7 months ago by seta • 1.2k • updated 7 months ago by Emily_Ensembl ♦ 19k
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