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<prev • 308 results • page 1 of 11 • next >
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Using SnpEff on Galaxy
vcf assembly ngs variant snp written 19 days ago by pmenon0998 • 0
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1
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1
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Validating Predictions Of Small Insertions / Deletions
gatk variant written 6.0 years ago by Ron • 990 • updated 29 days ago by Biostar ♦♦ 20
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633
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19 follow
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Tutorial: Resources / databases for clinical interpretation of cancer variants
cancer interpretation tutorial variant annotation clinical written 4 months ago by Malachi Griffith ♦ 18k
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How to integrate custom variant callers for consensus genotyping using CGES?
genotyping cges consens variant germline written 4 weeks ago by lakhujanivijay ♦ 4.8k
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few variants annotated with dbSNFP3.5a
vcf sbnsfp dbsnp variant written 8 weeks ago by Myosotis1979 • 10 • updated 8 weeks ago by RamRS ♦ 25k
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How to count variant occurrences in .vcf
.vcf ngs variant occurance snp written 12 months ago by darceyc17 • 0 • updated 8 weeks ago by Biostar ♦♦ 20
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conversion of genomic variant to coding variant to protein variant
coordinates variant snp conversion written 8 weeks ago by justinms • 10
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134
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STAR error (segmentation fault) in Aligning reads
reads ngs alignment variant star written 9 weeks ago by spriyansh29 • 30
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Problems installing the new VCF File Visualization tool VIVA
vcf visualization viva variant julia written 3 months ago by gcooper1245 • 10
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12 follow
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Recommendations For Python Vcf Parser/Writer?
vcf python variation variant written 8.2 years ago by Reece • 270 • updated 3 months ago by Dataman • 310
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Detecting variants in mapped reads against 16S rRNA reference sequence
rrna variant prokka written 3 months ago by claping • 0
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131
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ClinVar and HGVS variant (insertion) definition for protein sequence
hgvs protein clinvar variant insertion written 3 months ago by Yu • 110
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140
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Meaning of minus ("-") sign in frameshift protein variant nomenclature
annotation ngs variant nomenclature written 4 months ago by bhuwanhld18 • 0
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218
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Need recommendations of RNA-Seq somatic variant calling pipeline
somatic variant rna-seq written 4 months ago by Zhenyu Zhang • 260
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Understanding the output of pileup2snp
variant samtools snp varscan written 6 months ago by e.rempel • 790 • updated 4 months ago by Biostar ♦♦ 20
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Job: Variant Analyst-Genomics at UAB, Birmingham, Alabama
analyst genomics variant job exome disease written 4 months ago by cgds • 10
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327
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Methods for Doing Consensus Variant Calling between multiple callers
consensus wes calling variant dna written 6 months ago by djevanclark • 40
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162
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Positions of variant in certain depth
variant sam written 5 months ago by avichaireich • 0
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why there is 0/0 genotyp in VCF file?
vcf gatk variant written 6 months ago by star • 210
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7 follow
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Zygosity Of A Copy Number Variant
genome variant cnv written 8.1 years ago by Pascal • 1.5k • updated 7 months ago by Biostar ♦♦ 20
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336
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GATK SplitNCigarReads Error
gatk variant rna-seq written 7 months ago by BAGeno • 160
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2
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219
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uniprot variant classification DB retireve
variant vep uniprot ensembl written 7 months ago by cocchi.e89 • 50 • updated 7 months ago by Elisabeth Gasteiger • 1.7k
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 7 months ago by cocchi.e89 • 50 • updated 7 months ago by Jean-Karim Heriche ♦ 21k
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Why do I have more than 5000 variants when I used a 5K snp array?
vcf alignment variant plink snp written 8 months ago by rgooley • 0 • updated 8 months ago by genomax ♦ 78k
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Question about annotation for duplication using annovar
annovar next-gen variant written 8 months ago by hns • 150 • updated 8 months ago by hns0410 • 10
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11 follow
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 2.6 years ago by Lauren • 60 • updated 8 months ago by Shicheng Guo • 8.1k
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271
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VARIANT effect retrieving
indel variant effect snv written 11 months ago by cocchi.e89 • 50 • updated 9 months ago by Biostar ♦♦ 20
2
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2
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648
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Read position bias (RPB and PV4) fields from samtools mpileup: how to get them?
rpb variant mpileup snp call written 21 months ago by Macspider • 3.0k • updated 9 months ago by al.bodrug • 50
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.2 years ago by Rlong • 340 • updated 9 months ago by isaacpei • 0
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Variants in Exon or Intron
exon variant intron written 9 months ago by zakkaknadine • 10 • updated 9 months ago by shawn.w.foley • 1.2k
<prev • 308 results • page 1 of 11 • next >
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