Showing: variantreset
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3
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2
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108
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2
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Any comparisons of read length for variant calling?
assembly next-gen variant snp gatk written 3 days ago by Sukhdeep Singh8.7k • updated 2 days ago by Brian Bushnell10k
2
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1
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90
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1
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0
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1
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112
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1
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1
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1
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115
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1
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 17 days ago by Macspider970 • updated 17 days ago by Pierre Lindenbaum92k
0
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1
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801
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1
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Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
1000genomes variant snp written 3.1 years ago by Zhenyu150 • updated 6 weeks ago by Biostar ♦♦ 10
0
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1
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100
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1
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VCF file period symbol in the genotype
vcf variant snp written 7 weeks ago by bharata1803190 • updated 7 weeks ago by finswimmer77120
0
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0
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87
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0
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0
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1
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152
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1
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Convert amino acid and nucleotide coding changes between notation formats
variant written 8 weeks ago by steve710 • updated 8 weeks ago by Petr Ponomarenko1.6k
2
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2
answers
158
views
2
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In GATK, SNPs and INDELs are called separately or together?
indel gatk variant snp written 8 weeks ago by Chen450 • updated 8 weeks ago by WouterDeCoster16k
12
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4
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1.1k
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4
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Determine sex from vcf file (or sequencing data)
vcf variant genotyping written 11 months ago by kulvait160 • updated 8 weeks ago by Biostar ♦♦ 10
6
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2
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136
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2
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Why annotation doesn't respect VCF field schema ?
vcf annotation format variant specification written 10 weeks ago by sacha730 • updated 10 weeks ago by EnsemblWill470
0
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0
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186
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0
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0
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0
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165
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0
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2
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0
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167
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0
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1
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5
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3.9k
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5
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Addin gene information to VCF file
annotation next-gen variant snp written 2.4 years ago by ScienceBuff30 • updated 3 months ago by duke0
2
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1
answer
314
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1
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Extract nucleotide read quartet from vcf file
vcf variant snp written 7 months ago by berge201570 • updated 3 months ago by Biostar ♦♦ 10
0
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1
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229
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1
answer
SVM based Filtering For NGS data
svm next-gen variant filtering written 3 months ago by manojkumarbioinfo20 • updated 3 months ago by Vivek1.6k
2
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1
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193
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1
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12
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4
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444
views
9 follow
4
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Best way to compare two samples in a VCF file
vcf comparison variant genotype snp written 4 months ago by Macspider970 • updated 4 months ago by novice560
50
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6
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18k
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23 follow
6
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New Fasta Sequence From Reference Fasta And Variant Calls File?
vcf fasta consensus variant written 6.1 years ago by Gaffa480 • updated 5 months ago by DragonDNA0
0
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1
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280
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1
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4
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1
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261
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1
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Variant Calling problem - find alternate heterozygous
vcf calling heterozygous variant written 5 months ago by Paul500 • updated 5 months ago by Zaag530
0
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1
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284
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1
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drug response variant datasets
snp variant drug response biobase written 7 months ago by arronslacey200 • updated 5 months ago by dyollluap140
0
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0
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316
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0
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12
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3
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4.6k
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9 follow
3
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Identifying De Novo Variants In Trio Data
gatk differential-expression variant written 4.8 years ago by Vivek1.6k • updated 6 months ago by daniel30
0
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215
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0
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2
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1
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332
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1
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1
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0
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279
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0
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2
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1
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343
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1
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How to make new VCF files myself?
vcf variant variantannotation written 8 months ago by Ameerosein70 • updated 7 months ago by chen760
5
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1
answer
637
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1
answer
23andme file format
vcf 23andme format variant written 7 months ago by bkellman10 • updated 7 months ago by Tonor390
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