Showing: variantreset
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Zygosity Of A Copy Number Variant
genome variant cnv written 7.6 years ago by Pascal1.5k • updated 4 weeks ago by Biostar ♦♦ 20
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GATK SplitNCigarReads Error
gatk variant rna-seq written 4 weeks ago by BAGeno140
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2
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120
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uniprot variant classification DB retireve
variant vep uniprot ensembl written 6 weeks ago by cocchi.e8930 • updated 6 weeks ago by Elisabeth Gasteiger1.6k
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 6 weeks ago by cocchi.e8930 • updated 6 weeks ago by Jean-Karim Heriche20k
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Why do I have more than 5000 variants when I used a 5K snp array?
vcf alignment variant plink snp written 7 weeks ago by rgooley0 • updated 7 weeks ago by genomax70k
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Question about annotation for duplication using annovar
annovar next-gen variant written 10 weeks ago by hns150 • updated 9 weeks ago by hns041010
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8 follow
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 2.1 years ago by Lauren50 • updated 10 weeks ago by Shicheng Guo7.7k
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165
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VARIANT effect retrieving
indel variant effect snv written 4 months ago by cocchi.e8930 • updated 12 weeks ago by Biostar ♦♦ 20
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 7.7 years ago by Rlong340 • updated 3 months ago by isaacpei0
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Variants in Exon or Intron
exon variant intron written 3 months ago by zakkaknadine10 • updated 3 months ago by shawn.w.foley840
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hom/het definition from Allelic Depth counts
ad count variant het hom written 3 months ago by cocchi.e8930 • updated 3 months ago by Vitis2.2k
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GATK Panel Of Normals (PoN)
gatk beta calling variant written 9 months ago by b.d237140 • updated 3 months ago by esraesmeray199010
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why A/T or C/G are ambiguous SNPs?
genome variant snp strand written 4 months ago by seta1.2k • updated 4 months ago by Emily_Ensembl18k
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130
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240
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5 follow
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How to check the allele strand of variants?
variant written 4 months ago by seta1.2k • updated 4 months ago by Emily_Ensembl18k
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Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 4.9 years ago by cristianrohr76830 • updated 4 months ago by Biostar ♦♦ 20
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Storing Varaint data from VCF
techstack ngs variant database written 5 months ago by mvkotekar20 • updated 4 months ago by floris.barthel40
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217
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New Variants Effect Prediction Tools
indel variant effect snv written 4 months ago by cocchi.e8930 • updated 4 months ago by Emily_Ensembl18k
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all non-ALT position in a VCF are non-variants?
vcf altered alt variant written 5 months ago by cocchi.e8930 • updated 5 months ago by Pierre Lindenbaum122k
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Is Re-Sequencing Of Trait-Associated-Regions Required To Capture The Causal Variant?
variant snp written 6.4 years ago by kumar.vinod81280 • updated 5 months ago by Biostar ♦♦ 20
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