Showing: variantreset
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4
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UTR size range for 5' UTR & 3' UTR variants
gene sequence biology variant written 17 hours ago by anupriyaverma1408100 • updated 16 hours ago by Emily_Ensembl12k
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104
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14
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4
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11 follow
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4
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1
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159
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1
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 28 days ago by Lauren M.10 • updated 28 days ago by Samuel Brady230
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144
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2
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2
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2.2k
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Selecting variants from a VCF file
vcf next-gen variant snp written 3.1 years ago by matt.christmas850 • updated 7 weeks ago by panatheod0
1
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1
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239
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1
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 4 months ago by Macspider1.2k • updated 8 weeks ago by Biostar ♦♦ 20
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111
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24
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1
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338
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7 follow
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Are these false somatic variants? Visual inspection with IGV
somatic variant mutations snp igv written 12 weeks ago by andreslanzos50 • updated 12 weeks ago by d-cameron770
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139
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1
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7
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4
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289
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6 follow
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3
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2
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246
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2
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Any comparisons of read length for variant calling?
assembly next-gen variant snp gatk written 3 months ago by Sukhdeep Singh9.0k • updated 3 months ago by Brian Bushnell13k
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197
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1
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0
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186
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0
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1
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887
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Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
1000genomes variant snp written 3.4 years ago by Zhenyu150 • updated 5 months ago by Biostar ♦♦ 20
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212
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1
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VCF file period symbol in the genotype
vcf variant snp written 5 months ago by bharata1803230 • updated 5 months ago by finswimmer360
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159
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0
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0
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1
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248
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1
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Convert amino acid and nucleotide coding changes between notation formats
variant written 5 months ago by steve790 • updated 5 months ago by Petr Ponomarenko2.4k
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2
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255
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2
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In GATK, SNPs and INDELs are called separately or together?
indel gatk variant snp written 5 months ago by Chen510 • updated 5 months ago by WouterDeCoster20k
15
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4
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1.6k
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4
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Determine sex from vcf file (or sequencing data)
vcf variant genotyping written 15 months ago by kulvait200 • updated 5 months ago by Biostar ♦♦ 20
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2
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222
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2
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Why annotation doesn't respect VCF field schema ?
vcf annotation format variant specification written 6 months ago by sacha770 • updated 6 months ago by EnsemblWill540
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279
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266
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234
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3
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5
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Addin gene information to VCF file
annotation next-gen variant snp written 2.7 years ago by ScienceBuff30 • updated 7 months ago by duke10
2
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1
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388
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1
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Extract nucleotide read quartet from vcf file
vcf variant snp written 10 months ago by berge201570 • updated 7 months ago by Biostar ♦♦ 20
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317
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1
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SVM based Filtering For NGS data
svm next-gen variant filtering written 7 months ago by manojkumarbioinfo20 • updated 7 months ago by Vivek1.9k
2
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1
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271
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1
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51
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6
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20k
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24 follow
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New Fasta Sequence From Reference Fasta And Variant Calls File?
vcf fasta consensus variant written 6.4 years ago by Gaffa490 • updated 8 months ago by DragonDNA40
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1
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386
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