Showing: variantreset
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7
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why A/T or C/G are ambiguous SNPs?
genome variant snp strand written 3 days ago by seta1.1k • updated 3 days ago by Emily_Ensembl18k
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53
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4
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1
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128
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5 follow
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How to check the allele strand of variants?
variant written 20 days ago by seta1.1k • updated 18 days ago by Emily_Ensembl18k
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0
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Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 4.5 years ago by cristianrohr76830 • updated 18 days ago by Biostar ♦♦ 20
0
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1
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81
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1
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1
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1
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106
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1
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5
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3
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210
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6 follow
3
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Storing Varaint data from VCF
techstack ngs variant database written 6 weeks ago by mvkotekar20 • updated 22 days ago by floris.barthel40
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107
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0
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5
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1
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140
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1
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New Variants Effect Prediction Tools
indel variant effect snv written 25 days ago by cocchi.e8910 • updated 25 days ago by Emily_Ensembl18k
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80
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99
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0
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109
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all non-ALT position in a VCF are non-variants?
vcf altered alt variant written 5 weeks ago by cocchi.e8910 • updated 5 weeks ago by Pierre Lindenbaum119k
3
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1
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166
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1
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3
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1
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1.2k
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Is Re-Sequencing Of Trait-Associated-Regions Required To Capture The Causal Variant?
variant snp written 6.1 years ago by kumar.vinod81280 • updated 6 weeks ago by Biostar ♦♦ 20
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3
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2.3k
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3
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Where To Get The Annotation File For The Nimblegen Seqcap Ez Exome V1
exome gatk variant bwa written 5.9 years ago by ewre220 • updated 6 weeks ago by 4779267570
0
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1
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195
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1
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How to count variant occurrences in .vcf
.vcf ngs variant occurance snp written 9 weeks ago by darceyc170 • updated 9 weeks ago by colindaven1.2k
1
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1
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234
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1
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RNA-SEQ SNP calling
indel variant snp rna-seq written 9 weeks ago by babji23180 • updated 9 weeks ago by JC7.7k
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172
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0
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1
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161
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1
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PolyPhen Humdiv vs HumVar discrepancies
polyphen variant humvar humdiv written 11 weeks ago by cocchi.e8910 • updated 11 weeks ago by manuel.belmadani730
2
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0
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250
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getting the HOM_REF genotypes using bcftools mpileup+call ?
bcftools variant call mpileup genotype written 12 weeks ago by Pierre Lindenbaum119k • updated 12 weeks ago by RamRS21k
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2
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1.9k
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2
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vcf-subset error: "Wrong number of fields" in vcf file
vcf vcf-subset variant vcftools 1000 genomes written 3.7 years ago by Lylthera0 • updated 4 months ago by zx87547.1k
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2
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2.3k
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7 follow
2
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Variant Annotation Integrator From Ucsc
exome variant written 5.7 years ago by ewre220 • updated 4 months ago by slcrick120
18
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5
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660
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9 follow
5
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Forum: Create a File format to store Variant
hgvs forum json variant standard written 9 months ago by sacha1.7k • updated 4 months ago by bdolin90
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1
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379
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1
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GATK Panel Of Normals (PoN)
gatk beta calling variant written 5 months ago by b.d237100
1
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1
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277
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1
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0
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0
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259
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0
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1
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1.3k
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1
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VCF file period symbol in the genotype
vcf variant snp written 2.1 years ago by bharata1803420 • updated 7 months ago by RamRS21k
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1
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329
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1
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6
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2
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3.1k
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2
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Check if REF allele is minor allele in any variant
ref variant minor allele written 4.4 years ago by RamRS21k • updated 8 months ago by Shicheng Guo7.4k
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1
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298
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1
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