Showing: variantreset
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Recommendations For Python Vcf Parser/Writer?
vcf python variation variant written 7.9 years ago by Reece270 • updated 9 days ago by Dataman310
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Understanding the output of pileup2snp
variant samtools snp varscan written 3 months ago by e.rempel780 • updated 6 weeks ago by Biostar ♦♦ 20
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why there is 0/0 genotyp in VCF file?
vcf gatk variant written 3 months ago by star190
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Zygosity Of A Copy Number Variant
genome variant cnv written 7.8 years ago by Pascal1.5k • updated 4 months ago by Biostar ♦♦ 20
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GATK SplitNCigarReads Error
gatk variant rna-seq written 4 months ago by BAGeno160
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uniprot variant classification DB retireve
variant vep uniprot ensembl written 4 months ago by cocchi.e8930 • updated 4 months ago by Elisabeth Gasteiger1.7k
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 4 months ago by cocchi.e8930 • updated 4 months ago by Jean-Karim Heriche21k
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Why do I have more than 5000 variants when I used a 5K snp array?
vcf alignment variant plink snp written 4 months ago by rgooley0 • updated 4 months ago by genomax74k
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Question about annotation for duplication using annovar
annovar next-gen variant written 5 months ago by hns150 • updated 5 months ago by hns041010
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 2.3 years ago by Lauren50 • updated 5 months ago by Shicheng Guo7.8k
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VARIANT effect retrieving
indel variant effect snv written 8 months ago by cocchi.e8930 • updated 6 months ago by Biostar ♦♦ 20
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.0 years ago by Rlong340 • updated 6 months ago by isaacpei0
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Variants in Exon or Intron
exon variant intron written 6 months ago by zakkaknadine10 • updated 6 months ago by shawn.w.foley1.1k
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hom/het definition from Allelic Depth counts
ad count variant het hom written 6 months ago by cocchi.e8930 • updated 6 months ago by Vitis2.3k
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GATK Panel Of Normals (PoN)
gatk beta calling variant written 12 months ago by Barry Digby220 • updated 6 months ago by esraesmeray199010
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why A/T or C/G are ambiguous SNPs?
genome variant snp strand written 7 months ago by seta1.2k • updated 7 months ago by Emily_Ensembl19k
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How to check the allele strand of variants?
variant written 7 months ago by seta1.2k • updated 7 months ago by Emily_Ensembl19k
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