Showing: variantreset
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vcf-subset error: "Wrong number of fields" in vcf file
vcf vcf-subset variant vcftools 1000 genomes written 3.4 years ago by Lylthera0 • updated 4 weeks ago by zx87546.2k
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Variant Annotation Integrator From Ucsc
exome variant written 5.5 years ago by ewre210 • updated 4 weeks ago by slcrick80
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Forum: Create a File format to store Variant
hgvs forum json variant standard written 6 months ago by sacha1.6k • updated 6 weeks ago by bdolin90
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VCF file period symbol in the genotype
vcf variant snp written 22 months ago by bharata1803390 • updated 4 months ago by RamRS20k
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Check if REF allele is minor allele in any variant
ref variant minor allele written 4.2 years ago by RamRS20k • updated 4 months ago by Shicheng Guo7.3k
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(Sanity check) Too many SNPs?
filter next-gen variant written 14 months ago by rightmirem50 • updated 6 months ago by Biostar ♦♦ 20
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How to know if a variant is sequencing or mapping artifact?
vcf variant freebayes written 6 months ago by kspata40 • updated 6 months ago by finswimmer8.9k
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SNPEff not showing SNP
annotation forum snpeff variant snp written 8 months ago by sanjay.bpkihs0 • updated 6 months ago by cpad011210k
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Get variant position knowing the gene name, base change, and NM#
gene genome coordinates variant written 7 months ago by bisansamara10 • updated 7 months ago by Tao260
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How does variant callers deal with N in the reference sequence?
genome reference N variant call written 7 months ago by pyjiang230 • updated 7 months ago by JC7.1k
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Variant calling on single-cell data
single-cell variant snp written 12 months ago by vinvan40 • updated 8 months ago by oneillkza70
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Inconsistency of allele depth in BAM and VCF
vcf allele depth variant bam written 8 months ago by CY270 • updated 8 months ago by Noushin N530
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How to visualize large VCF files
vcf variant calling snps variant snp written 2.7 years ago by bioinforesearchquestions190 • updated 9 months ago by Biostar ♦♦ 20
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Forum: SNP calling in 2018
gatk forum variant snp written 10 months ago by Picasa390 • updated 10 months ago by WouterDeCoster35k
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