Showing: variantreset
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2
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Meaning of 'tag' in the context of variants
interpretation variant written 6 weeks ago by andrewl10 • updated 1 day ago by Dan Gaston6.8k
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163
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5
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retrospective trio analysis from WGS SNPs
trio lineage pedigree variant snp written 16 days ago by harold.smith.tarheel3.8k • updated 16 days ago by andrew.j.skelton733.7k
3
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1
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176
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1
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determine loss- or gain-of-function of specific mutation
mutation variant snv written 4 weeks ago by igor4.5k • updated 4 weeks ago by mforde84900
7
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1
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248
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1
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UTR size range for 5' UTR & 3' UTR variants
gene sequence biology variant written 5 weeks ago by anupriyaverma1408100 • updated 5 weeks ago by Emily_Ensembl13k
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12 follow
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Is SNPeff still the standard for variant effect prediction?
exome annotation snpeff variant written 9 weeks ago by Lauren10 • updated 9 weeks ago by Samuel Brady230
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2
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Selecting variants from a VCF file
vcf next-gen variant snp written 3.2 years ago by matt.christmas850 • updated 12 weeks ago by panatheod0
1
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263
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1
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 5 months ago by Macspider1.5k • updated 3 months ago by Biostar ♦♦ 20
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136
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24
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377
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7 follow
1
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Are these false somatic variants? Visual inspection with IGV
somatic variant mutations snp igv written 4 months ago by andreslanzos50 • updated 4 months ago by d-cameron850
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159
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7
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330
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6 follow
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5
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Any comparisons of read length for variant calling?
assembly next-gen variant snp gatk written 5 months ago by Sukhdeep Singh9.0k • updated 5 months ago by Brian Bushnell14k
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1
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0
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206
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Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
1000genomes variant snp written 3.5 years ago by Zhenyu150 • updated 6 months ago by Biostar ♦♦ 20
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264
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VCF file period symbol in the genotype
vcf variant snp written 6 months ago by bharata1803230 • updated 6 months ago by finswimmer430
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176
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Convert amino acid and nucleotide coding changes between notation formats
variant written 6 months ago by steve880 • updated 6 months ago by Petr Ponomarenko2.4k
2
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2
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286
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2
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In GATK, SNPs and INDELs are called separately or together?
indel gatk variant snp written 7 months ago by Chen560 • updated 7 months ago by WouterDeCoster21k
15
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4
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4
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Determine sex from vcf file (or sequencing data)
vcf variant genotyping written 16 months ago by kulvait200 • updated 7 months ago by Biostar ♦♦ 20
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2
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241
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Why annotation doesn't respect VCF field schema ?
vcf annotation format variant specification written 7 months ago by sacha800 • updated 7 months ago by EnsemblWill550
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259
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3
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Addin gene information to VCF file
annotation next-gen variant snp written 2.8 years ago by ScienceBuff30 • updated 8 months ago by duke10
2
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1
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411
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1
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Extract nucleotide read quartet from vcf file
vcf variant snp written 11 months ago by berge201570 • updated 8 months ago by Biostar ♦♦ 20
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347
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1
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SVM based Filtering For NGS data
svm next-gen variant filtering written 8 months ago by manojkumarbioinfo20 • updated 8 months ago by Vivek1.9k
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