Showing selected topics • reset
<prev • 119 results • page 1 of 4 • next >
0
votes
0
answers
55
views
0
answers
0
votes
0
answers
87
views
0
answers
0
votes
0
answers
129
views
0
answers
include vcf header
varscan written 5 months ago by archie90
1
vote
2
answers
382
views
2
answers
0
votes
0
answers
198
views
0
answers
0
votes
0
answers
282
views
0
answers
0
votes
0
answers
342
views
0
answers
Understanding the output of pileup2snp
variant samtools snp varscan written 12 months ago by e.rempel890 • updated 10 months ago by Biostar ♦♦ 20
1
vote
0
answers
207
views
0
answers
1
vote
1
answer
407
views
1
answer
VarScan.v2.4.3 generating incomplete or partial VCF file
variant calling exomeseq snp varscan written 12 months ago by Sandeep260 • updated 12 months ago by 2nelly190
4
votes
1
answer
453
views
1
answer
Using Varscan without a matched normal
varscan wes written 12 months ago by sugus50 • updated 12 months ago by Chris Miller21k
0
votes
0
answers
374
views
0
answers
0
votes
1
answer
411
views
1
answer
1
vote
0
answers
609
views
0
answers
Running time in different callers
varscan snv mutect wgs written 15 months ago by A3.8k
2
votes
2
answers
2.0k
views
2
answers
Finding SNPs per gene for SNP Density in UNIX
varscan grep unix snp written 4.8 years ago by crawlthrutacos0 • updated 15 months ago by Biostar ♦♦ 20
6
votes
1
answer
2.0k
views
1
answer
Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 3.7 years ago by Jerome Lin20 • updated 16 months ago by Biostar ♦♦ 20
0
votes
2
answers
373
views
2
answers
bam-readcount error Expect Library
varscan snp bam-readcount sequencing written 16 months ago by 9521ljh20 • updated 16 months ago by Pierre Lindenbaum129k
4
votes
0
answers
1.2k
views
0
answers
2
votes
1
answer
552
views
1
answer
How to annotate Copy Number Variations (Output of VarScan2)
varscan cnv annotation written 17 months ago by Rahil150 • updated 17 months ago by Pierre Lindenbaum129k
2
votes
1
answer
795
views
1
answer
VarScan: How is the DP score in a .vcf calculated?
vcf varscan written 18 months ago by James Reeve100 • updated 18 months ago by igor11k
3
votes
1
answer
520
views
1
answer
0
votes
0
answers
381
views
0
answers
Can I use VarScan for tumor_time2/tumor_time1 CNA and SNP calling?
cna varscan cnv snp written 20 months ago by Pin.Bioinf270 • updated 19 months ago by Biostar ♦♦ 20
11
votes
1
answer
7.0k
views
8 follow
1
answer
Work With Dnacopy (Bioconductor) And Varscan Copynumber Results
varscan bioconductor copynumber written 9.0 years ago by Mdeng510 • updated 20 months ago by noonbobnoon10
0
votes
0
answers
463
views
0
answers
1
vote
1
answer
722
views
1
answer
0
votes
0
answers
572
views
0
answers
Problem understanding GT from Varscan's vcf output
varscan written 21 months ago by ww22runner0 • updated 21 months ago by RamRS28k
1
vote
1
answer
534
views
1
answer
2
votes
1
answer
731
views
1
answer
2
votes
2
answers
2.2k
views
2
answers
SciClone on WES data
dnacopy varscan clonality wes sciclone written 3.2 years ago by mar.ark.parr40 • updated 22 months ago by aliz06110
1
vote
0
answers
514
views
0
answers
0
votes
1
answer
738
views
1
answer
How to get "normal.pileup" file for varscan somatic calling
varscan written 23 months ago by aadam354110 • updated 23 months ago by ATpoint36k
<prev • 119 results • page 1 of 4 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1319 users visited in the last hour