Showing: varscanreset
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identifying TP53 germline mutations which are also in tumor cells.
somatic germline tp53 mutect varscan written 15 days ago by lait80 • updated 15 days ago by Noushin N490
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Work With Dnacopy (Bioconductor) And Varscan Copynumber Results
varscan bioconductor copynumber written 6.6 years ago by Mdeng510 • updated 9 weeks ago by 321bixin0
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varscan copy number error
varscan cnv written 10 weeks ago by mittu1602140
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Why CNV calling using VarScan need two steps of fragments merging?
varscan copy number variant cnv written 11 weeks ago by CY90 • updated 11 weeks ago by arta240
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Variant Calling in Low-Complexity Regions
indel low-complexity variants snp varscan written 4 months ago by ATpoint3.0k • updated 3 months ago by Biostar ♦♦ 20
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Running THetA2 with Varscan input?
varscan theta tumorpurity written 8 months ago by hshah20 • updated 4 months ago by j.p.albrecht30
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VarScan2 Parsing Error
varscan java written 5 months ago by ATpoint3.0k
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Tool: Varscan: Variant Detection In Massively Parallel Sequencing Data
indel varscan tool snp written 5.8 years ago by Istvan Albert ♦♦ 75k • updated 6 months ago by AcademicDialysis60
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SciClone on WES data
dnacopy varscan clonality wes sciclone written 9 months ago by mar.ark.parr30 • updated 8 months ago by Chris Miller19k
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varscan v2.3.9 filter Parse exception
varscan written 21 months ago by cafelumiere1270 • updated 9 months ago by jlx02480
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How to exclude noisy CNV from study?
dnacopy varscan copy number variation cnv wes written 11 months ago by rmateos.110 • updated 10 months ago by vchris_ngs4.3k
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Problems After Loading Varscan 2 Output Into Bioconductor.Dnacopy
exome varscan copynumber cnv sequencing written 5.0 years ago by sousuffer20 • updated 10 months ago by Biostar ♦♦ 20
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How to interpret tandem SNP in
varscan ngs dna-seq variants written 11 months ago by Paul1.0k
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varscan2 mpileup2snp output contains indels
vcf indels mpileup2snp varscan written 23 months ago by AW340 • updated 12 months ago by Biostar ♦♦ 20
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What allele frequency threshold do you recommend?
varscan written 14 months ago by agata88630 • updated 12 months ago by Biostar ♦♦ 20
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Exome-seq; Which tools to predict significantly muated genes .
varscan music cnv written 16 months ago by Chirag Nepal2.0k • updated 15 months ago by Biostar ♦♦ 20
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Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 15 months ago by Jerome Lin20 • updated 15 months ago by harold.smith.tarheel4.0k
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Varscan mpileup2snp coverage filter
mpileup2snp varscan written 15 months ago by AW340
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Variant Calling in Somatic mode
vcf varscan variants snp sequencing written 16 months ago by Paul1.0k • updated 16 months ago by venu4.8k
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