Showing: varscanreset
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VarScan2 Parsing Error
varscan java written 4 days ago by ATPoint1.1k
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Tool: Varscan: Variant Detection In Massively Parallel Sequencing Data
indel varscan tool snp written 5.4 years ago by Istvan Albert ♦♦ 73k • updated 5 weeks ago by AcademicDialysis60
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SciClone on WES data
dnacopy varscan clonality wes sciclone written 4 months ago by mar.ark.parr30 • updated 3 months ago by Chris Miller18k
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varscan v2.3.9 filter Parse exception
varscan written 15 months ago by cafelumiere1270 • updated 4 months ago by jlx02480
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How to exclude noisy CNV from study?
dnacopy varscan copy number variation cnv wes written 6 months ago by rmateos.110 • updated 5 months ago by vchris_ngs4.0k
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Problems After Loading Varscan 2 Output Into Bioconductor.Dnacopy
exome varscan copynumber cnv sequencing written 4.5 years ago by sousuffer20 • updated 5 months ago by Biostar ♦♦ 20
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varscan2 mpileup2snp output contains indels
vcf indels mpileup2snp varscan written 18 months ago by AW280 • updated 7 months ago by Biostar ♦♦ 20
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What allele frequency threshold do you recommend?
varscan written 9 months ago by agata88610 • updated 7 months ago by Biostar ♦♦ 20
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Exome-seq; Which tools to predict significantly muated genes .
varscan music cnv written 10 months ago by Chirag Nepal1.9k • updated 10 months ago by Biostar ♦♦ 20
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Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 10 months ago by Jerome Lin20 • updated 10 months ago by harold.smith.tarheel3.8k
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Varscan mpileup2snp coverage filter
mpileup2snp varscan written 10 months ago by AW280
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Variant Calling in Somatic mode
vcf varscan variants snp sequencing written 10 months ago by Paul650 • updated 10 months ago by venu4.3k
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sciClone:input data wrong
dnacopy varscan copy number sciclone cluster written 11 months ago by lyan.liu0 • updated 11 months ago by Chris Miller18k
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indel preprocessing prior to bam-readcount
indel varscan fpfilter.pl bam-readcount written 11 months ago by Jokhe40 • updated 11 months ago by m.b0
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Finding SNPs per gene for SNP Density in UNIX
varscan grep unix snp written 22 months ago by crawlthrutacos0 • updated 13 months ago by Alex Reynolds20k
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VarScan and Samtools - how to process my data?
varscan ngs sequencing samtools pipeline written 13 months ago by ciemanek20 • updated 13 months ago by poisonAlien2.4k
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