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How to summarize variant data in multiple VCF files?
vcf varscan2 summary comut visualization written 3.9 years ago by Jokhe120 • updated 9 months ago by lincoln.harris0
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fpfilter - All variants fail
varscan2 fpfilter written 16 months ago by ar.satkhol180 • updated 16 months ago by ATpoint38k
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Annotating varscan2 output
annotation varscan2 written 16 months ago by ar.satkhol180 • updated 16 months ago by bernatgel2.6k
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Downstream analysis of VCF files obtained from VarScan2
vcf wes snpeff varscan2 somatic variations written 22 months ago by Rahil170 • updated 17 months ago by bari.ballew230
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How to convert VarScan TAB format to VCF?
genome varscan2 written 4.4 years ago by SmallChess530 • updated 18 months ago by marcofraca20
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Varscan2 copynumber 'Parsing Exception' error
varscan2 copynumber samtools bam whole exome written 4.1 years ago by Vanish00710 • updated 23 months ago by jgarces20
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germline calling of tumor-normal paired sample germline by varscan2
tumor-normal varscan2 germline written 2.4 years ago by oghzzang40 • updated 2.3 years ago by ATpoint38k
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varscan not taking opstions
mpileup2snp varscan2 setting written 2.4 years ago by fabbri.marco0 • updated 2.4 years ago by Pierre Lindenbaum130k
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varscan2 somatic sip
somatic varscan2 snp written 2.6 years ago by fabbri.marco0
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Copynumber calculation problem
varscan2 cnv written 2.6 years ago by jinxinhao198860 • updated 2.6 years ago by Kevin Blighe65k
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Galaxy workflow queue
galaxy varscan2 written 3.2 years ago by louis.gil0070
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SomaticSniper VS Varscan2
varscan2 somaticsniper variant_calling written 3.6 years ago by user230613280 • updated 3.6 years ago by Chris Miller21k
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only chrM in the varscan2 copynumber output
copynumber varscan2 chrm written 3.8 years ago by lhaiyan340 • updated 3.8 years ago by WouterDeCoster44k
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about computer memory and mpileup files
varscan2 memory snp written 4.0 years ago by Bogdan1.0k • updated 4.0 years ago by karl.stamm3.8k
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Visualize VarScan2 Copy Number Aberrations in IGV
alignment sequence varscan2 tool igv written 4.4 years ago by plumgwodehouse0 • updated 4.4 years ago by genomax89k
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