Showing: vcfreset
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49
votes
0
answers
4.2k
views
45 follow
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Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
vcf 1000 genomes tutorial pca plink written 12 months ago by Kevin Blighe28k • updated 25 days ago by genomax56k
47
votes
5
answers
30k
views
31 follow
5
answers
Extract Sub-Set Of Regions From Vcf File
vcf genome tabix filter written 6.3 years ago by Rubal7700 • updated 12 months ago by geocarvalho80
46
votes
3
answers
16k
views
29 follow
3
answers
Pca From Vcf Files
vcf genome pca written 6.4 years ago by Rubal7700 • updated 2.3 years ago by mkulecka300
49
votes
4
answers
31k
views
29 follow
4
answers
Filtering Vcf File
vcf indel vcftools snp written 6.1 years ago by bioinfo680 • updated 11 months ago by DataFanatic100
40
votes
2
answers
7.4k
views
29 follow
2
answers
52
votes
6
answers
25k
views
24 follow
6
answers
New Fasta Sequence From Reference Fasta And Variant Calls File?
vcf fasta consensus variant written 7.5 years ago by Gaffa490 • updated 22 months ago by FatihSarigol100
79
votes
4
answers
43k
views
24 follow
4
answers
Generate vcf.gz file and its index file vcf.gz.tbi
vcf tabix written 5.8 years ago by lyz10302012310 • updated 7 days ago by zx87545.0k
31
votes
6
answers
13k
views
23 follow
6
answers
Multi-Sample Vcf To Phylogenetic Tree.
vcf written 5.0 years ago by William4.3k • updated 23 months ago by Sergey Naumenko330
18
votes
6
answers
8.3k
views
22 follow
6
answers
Where Can I Download Vcf Files For Publicly Available Data?
vcf snp download written 6.8 years ago by Kevin600 • updated 4.3 years ago by e.cirillo89230
30
votes
5
answers
17k
views
20 follow
5
answers
How To Split Multiple Samples In Vcf File Generated By Gatk?
vcf gatk split written 5.1 years ago by newDNASeqer600 • updated 17 months ago by Biostar ♦♦ 20
47
votes
7
answers
30k
views
18 follow
7
answers
How Can I Merge A Large Amount Of Vcf Files?
vcf merge vcftools snp written 6.2 years ago by Matt W230 • updated 10 weeks ago by ATpoint7.6k
15
votes
5
answers
5.6k
views
17 follow
5
answers
25
votes
3
answers
16k
views
16 follow
3
answers
How Can I Count Snps In My Vcf Files?
vcf snp awk written 6.2 years ago by Matt W230 • updated 3.1 years ago by ravi.uhdnis140
16
votes
5
answers
15k
views
16 follow
5
answers
Combining Data Of Multiple Vcfs Into One.
vcf variant-calling written 5.3 years ago by Sheila240 • updated 5.3 years ago by zx87545.0k
23
votes
4
answers
9.8k
views
16 follow
4
answers
Converting Gvcf Files Into Vcf
vcf written 5.0 years ago by always_learning930 • updated 5.0 years ago by Chris Saunders170
41
votes
2
answers
15k
views
15 follow
2
answers
Phased And Unphased Genotypes In Vcf Files: Does The Order Of Alleles Matter?
vcf genotyping written 7.6 years ago by Chronos540 • updated 5.4 years ago by sliders50
22
votes
6
answers
11k
views
15 follow
6
answers
Splitting A Vcf File
vcf written 7.0 years ago by Sebastian10 • updated 11 months ago by mplace20
20
votes
5
answers
12k
views
15 follow
5
answers
Comparing Genotypes In Two Vcf Files
vcf genotyping written 5.8 years ago by enza.colonna80 • updated 3.4 years ago by Anop Singh Ranawat0
15
votes
4
answers
6.7k
views
15 follow
4
answers
Vcf File --> Gene/Protein Mutation Information
vcf annovar mutation written 5.2 years ago by newDNASeqer600 • updated 5.2 years ago by Alex Paciorkowski3.3k
20
votes
2
answers
6.0k
views
15 follow
2
answers
Best Discordant Pair Structural Variant (Sv) Caller?
vcf sv variant caller discordant written 5.2 years ago by William4.3k • updated 2.8 years ago by Malachi Griffith16k
23
votes
2
answers
12k
views
15 follow
2
answers
27
votes
4
answers
22k
views
13 follow
4
answers
Understanding Vcf File Format
vcf format written 6.8 years ago by Tryingtogetthere150 • updated 6.5 years ago by Jorge Amigo11k
42
votes
6
answers
9.8k
views
13 follow
6
answers
25
votes
4
answers
4.5k
views
13 follow
4
answers
32
votes
6
answers
4.8k
views
12 follow
6
answers
Should We Be Using Much More Json In Our Delimited Data Formats?
vcf gff written 7.7 years ago by Casbon3.2k • updated 7.7 years ago by Erik Garrison2.1k
34
votes
3
answers
19k
views
12 follow
3
answers
Can'T Locate Vcf.Pm Vcftools
vcf vcftools written 6.8 years ago by Deniz180 • updated 3.4 years ago by SmallChess460
17
votes
3
answers
11k
views
12 follow
3
answers
Gwas Stepwise Tutorial
vcf gwas ngs 1000genomes written 5.1 years ago by always_learning930
8
votes
3
answers
12k
views
12 follow
3
answers
Annotate A Vcf File
vcf annotation written 5.0 years ago by win790 • updated 16 months ago by k.kathirvel93100
9
votes
7
answers
4.3k
views
12 follow
7
answers
Reliable Tools To Filter Vcf Format Files
vcf tools variant written 5.0 years ago by Tonyzeng300 • updated 5.0 years ago by dangenet90
31
votes
3
answers
360
views
12 follow
3
answers
Fast way to extract part of genotypes data from 1000 Genome VCF files
fast vcf 1000genome written 4 weeks ago by Shicheng Guo6.5k • updated 4 weeks ago by chrchang5233.9k
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