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8
votes
3
answers
3.9k
views
3
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Adding An Extra Column To A Vcf File.
vcf format next-gen sequencing written 8.4 years ago by Pierre Lindenbaum112k • updated 14 days ago by Ram17k
5
votes
1
answer
2.6k
views
1
answer
Convert Vcf3.3 To 4.0
vcf written 8.1 years ago by Zach Stednick640 • updated 8.1 years ago by Jts1.2k
12
votes
2
answers
4.8k
views
7 follow
2
answers
Converting A Snp Gff3 File To Vcf Format
vcf gff snp written 8.1 years ago by Chris Penkett470 • updated 8.1 years ago by Brugger0
8
votes
2
answers
1.6k
views
2
answers
What Does Chr "Par" Stand For In The Latest 1000Genomes Vcf File?
vcf genome written 7.9 years ago by Biomed4.4k • updated 7.9 years ago by Shigeta460
23
votes
4
answers
4.3k
views
8 follow
4
answers
Dbsnp132 1000Genomes Vcf File Info Field: Bitfield Structure
vcf genome dbsnp written 7.8 years ago by Biomed4.4k • updated 4.2 years ago by cmdcolin870
17
votes
2
answers
8.6k
views
6 follow
2
answers
Merging Vcf Files And Filling In Missing Genotypes
vcf indel merge snp written 7.8 years ago by Allpowerde1.2k • updated 7.7 years ago by Jashapiro230
9
votes
4
answers
19k
views
5 follow
4
answers
Help On Merging Vcf Files By Using Vcftools
vcf merge vcftools written 7.7 years ago by Jianfengmao310 • updated 5.1 years ago by Biostar ♦♦ 20
1
vote
2
answers
2.8k
views
5 follow
2
answers
32
votes
6
answers
4.8k
views
12 follow
6
answers
Should We Be Using Much More Json In Our Delimited Data Formats?
vcf gff written 7.6 years ago by Casbon3.2k • updated 7.6 years ago by Erik Garrison2.1k
18
votes
5
answers
9.8k
views
10 follow
5
answers
How To Split A .Vcf.Gz File
vcf vcftools split written 7.6 years ago by Jorge Amigo11k
41
votes
2
answers
15k
views
15 follow
2
answers
Phased And Unphased Genotypes In Vcf Files: Does The Order Of Alleles Matter?
vcf genotyping written 7.6 years ago by Chronos540 • updated 5.4 years ago by sliders50
1
vote
2
answers
5.1k
views
5 follow
2
answers
Convert Bed To Vcf4.0
vcf bed conversion written 7.6 years ago by Bair0 • updated 7.6 years ago by Hypotheses70
4
votes
2
answers
1.5k
views
2
answers
Can Substitutions Be Encoded In Vcf Format
vcf genome format written 7.6 years ago by Stephane Plaisance370 • updated 7.6 years ago by Laura1.7k
3
votes
1
answer
2.1k
views
1
answer
Ensembl Variant_Effect_Predictor.Pl Raises An Error
vcf ensembl api prediction snp written 7.6 years ago by Pierre Lindenbaum112k • updated 7.6 years ago by iansealy250
4
votes
1
answer
2.7k
views
1
answer
52
votes
6
answers
25k
views
24 follow
6
answers
New Fasta Sequence From Reference Fasta And Variant Calls File?
vcf fasta consensus variant written 7.5 years ago by Gaffa490 • updated 22 months ago by FatihSarigol100
26
votes
5
answers
6.7k
views
9 follow
5
answers
How To Efficiently Remove Snps That Are Present In All Samples?
vcf samtools snp written 7.5 years ago by Ian5.2k • updated 7.5 years ago by Deniz180
17
votes
2
answers
4.8k
views
2
answers
Do People Import Vcf Files Into Databases?
vcf database written 7.5 years ago by Jeremy Leipzig17k • updated 7.5 years ago by lh331k
31
votes
2
answers
8.2k
views
10 follow
2
answers
How To Separate Snp Variants From Indel Variants In The Same Vcf File
vcf vcftools written 7.5 years ago by Jianfengmao310 • updated 7.5 years ago by Pierre Lindenbaum112k
7
votes
2
answers
4.1k
views
2
answers
Export Allele Frequency Of All Alleles In The Whole Data For A Subsets Of Individuals
vcf vcftools written 7.5 years ago by Jianfengmao310 • updated 7.5 years ago by lh331k
6
votes
2
answers
4.3k
views
5 follow
2
answers
Changing Genome Coordinates For Vcf
vcf written 7.4 years ago by Jts1.2k • updated 4.5 years ago by Biostar ♦♦ 20
5
votes
1
answer
6.3k
views
1
answer
Pileup To Vcf Format
vcf pileup written 7.4 years ago by Pri20 • updated 4.8 years ago by Biostar ♦♦ 20
0
votes
2
answers
3.5k
views
5 follow
2
answers
Easy Way To Change Reference Alleles In Large Vcf File?
vcf reference plink written 7.4 years ago by Kking0 • updated 7.4 years ago by Raony Guimaraes100
4
votes
2
answers
2.8k
views
2
answers
Vcf Format: Different Ways To Express The Same Variant Information
vcf samtools variant vcftools written 7.4 years ago by Pablo1.9k • updated 7.4 years ago by Allpowerde1.2k
17
votes
1
answer
17k
views
8 follow
1
answer
Dbsnp Vcf Data Corresponding To Hg19/Grch37 Assembly
exome vcf dbsnp hg written 7.4 years ago by Khader Shameer17k • updated 7.4 years ago by Brad Chapman9.2k
1
vote
1
answer
3.7k
views
1
answer
Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 7.3 years ago by Pi510 • updated 3.0 years ago by Biostar ♦♦ 20
3
votes
3
answers
4.9k
views
9 follow
3
answers
Dbsnp In Vcf Format
vcf format dbsnp written 7.3 years ago by Andrea_Bio2.5k • updated 7.2 years ago by Rituriya0
3
votes
1
answer
2.0k
views
1
answer
4
votes
2
answers
11k
views
2
answers
Meaning Of Samtools 'Vcfutils.Pl Varfilter -Q'?
vcf samtools variant written 7.3 years ago by Ian5.2k • updated 7.3 years ago by Jeremy Leipzig17k
4
votes
1
answer
7.0k
views
1
answer
How To Install "Vcftools" On Mac Os X 10.6.7
vcf installation vcftools error written 7.3 years ago by Huayang0 • updated 7.3 years ago by Gww2.6k
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