Showing: vcftoolsreset
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vcf-consensus outputs sequence same as reference
1000 genomes vcf-consensus vcftools written 9 months ago by seretnacho0 • updated 3 days ago by rajesh.msch0
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determine unique snp
python samtools vcftools snp mapping written 8 days ago by slimane.khayi20 • updated 8 days ago by Pierre Lindenbaum89k
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Filreing vcf files not giving any results
vcflib vcftools gvcf written 24 days ago by abdulbenissa0 • updated 23 days ago by willgilks130
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Error in vcf-subset while processing variants with multiple ALTs
vcftools snp sequencing written 12 weeks ago by Molly0 • updated 5 weeks ago by Biostar ♦♦ 10
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Why is it absolutely necessary to filter a VCF?
vcf bcftools samtools vcftools filtering written 5 weeks ago by beausoleilmo60 • updated 5 weeks ago by mforde84440
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nucleotide divergency (--site-pi) in VCF tools
vcftools written 3 months ago by qwzhang060130 • updated 6 weeks ago by Biostar ♦♦ 10
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How common are Deletions and Indels?
radseq rtg vcftools written 6 weeks ago by beausoleilmo60 • updated 6 weeks ago by Brian Bushnell9.8k
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How best to parse samtools mpileup results?
vcf samtools vcftools mpileup written 7 weeks ago by yarmda0 • updated 7 weeks ago by Pierre Lindenbaum89k
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vcftools: the length of each row is not same
vcftools written 11 months ago by zwang100 • updated 9 weeks ago by c.v.oflynn90
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Update 'ID' column in VCF file using BCFtools annotate
bcftools vcftools written 10 weeks ago by mrxcm310 • updated 10 weeks ago by William3.6k
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Filtering Imputation output: how to filter on a VCF INFO field
imputation minimac3 plink filtering vcftools written 6 months ago by mmagoo640 • updated 10 weeks ago by Tao110
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Generating consensus sequences
consensus fasta vcftools bwa written 12 weeks ago by Lina F70 • updated 12 weeks ago by haro8760
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plotting allele frequencies generated using vcftools
genome gwas plots snp vcftools written 3 months ago by Dtriumph0 • updated 3 months ago by venu3.3k
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bcftools filter or bcftools isec to EXCLUDE dbSNP snps
filter bcftools vcftools isec dbsnp written 4 months ago by bgold040 • updated 4 months ago by harold.smith.tarheel3.5k
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split large vcf into user defined regions
vcf vcftools sequencing written 4 months ago by zelia.worman0 • updated 4 months ago by venkateshr89640
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VCFtools filter - genotype quality score changes
genotype quality gq vcftools written 5 months ago by AW250 • updated 5 months ago by Brice Sarver2.3k
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Filter VCF by sample?
1000genomes vcftools written 6 months ago by cmdcolin330 • updated 5 months ago by trausch530
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