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Multiple alleles in REF and ALT in VCF file
vcf indel allele bcftools vcftools written 6 weeks ago by Volka120 • updated 7 days ago by Biostar ♦♦ 20
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Adding SNP ID to original VCF file
plink snp vcftools written 4 weeks ago by rs1460 • updated 4 weeks ago by chrchang5237.7k
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VCFtools not filtering VCF file by positions
vcf vcftools snp written 5.4 years ago by devenvyas670 • updated 7 weeks ago by mmunsanbioinfo0
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Failed to open plain.vcf: unknown file type
bgzip vcf.gz bcftools vcftools written 3 months ago by obidobi30 • updated 3 months ago by Jorge Amigo12k
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Merging multiple .ped/.map files for PLINK analisys purposes
plink snp vcftools written 3 months ago by giusdalt950 • updated 3 months ago by chrchang5237.7k
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Error When Merging Vcfs With Vcftools'S Vcf-Merge Function
vcf vcftools written 7.7 years ago by Sheila330 • updated 4 months ago by Biostar ♦♦ 20
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--max-alleles argument not recognized
vcftools snp written 5.9 years ago by boris0 • updated 5 months ago by Biostar ♦♦ 20
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vcftools --fst-window- problems
fst-window vcftools written 7 months ago by florycamacho3050 • updated 6 months ago by fu_entomology20
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VCF tools --freq output file
vcftools allelefrequency fileformat written 8 months ago by Inquisitive8995190 • updated 8 months ago by Kevin Blighe71k
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vcftools discrepancy in mean depth values per site
vcf depth coverage snp vcftools written 8 months ago by oscarmirap10 • updated 8 months ago by Kevin Blighe71k
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Vcftools order of operations for filtering?
genome vcftools snp written 8 months ago by aj0 • updated 8 months ago by Pierre Lindenbaum134k
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How to filter a VCF file with a list of CHR or contig IDs?
vcf chromosome contigs vcftools awk written 8 months ago by acoles10 • updated 8 months ago by drkennetz510
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From VCF, create only .tfam file
vcf vcftools tped tfam plink written 5.1 years ago by mpauper20 • updated 8 months ago by chrchang5237.7k
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Help On Merging Vcf Files By Using Vcftools
vcf merge vcftools written 10.2 years ago by Jianfengmao310 • updated 9 months ago by Biostar ♦♦ 20
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