Showing: vcftoolsreset
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Set Difference in VCF Files
vcf vcftools written 2.2 years ago by andrew.j.skelton734.7k • updated 11 days ago by Biostar ♦♦ 20
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vcftools - installing on MAC
vcf vcftools written 28 days ago by filippo.corponi0 • updated 28 days ago by Ram14k
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vcftools: unwanted filtering
vcftools snp written 6 weeks ago by Molly_K20
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vcftools nucleotide diversity statistic (pi)
vcftools written 6 weeks ago by modi202020 • updated 6 weeks ago by caw5cv0
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SnpMatrix from VCF file
vcf matrixeqtl snpmatrix vcftools eqtl written 13 months ago by Dhana50 • updated 7 weeks ago by Leandro Lima880
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Using vcftools to filter SNPs by a linkage disequilibrium (r2) threshold
vcftools written 9 weeks ago by shyamie0 • updated 9 weeks ago by Kevin Blighe17k
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Detecting outlier loci from pairwise Fst values
outlier fst vcftools written 2.9 years ago by Earendil10 • updated 3 months ago by Shangzhe Zhang0
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vcftools/ plink conserve phase information
phase information haplotype plink vcftools written 3 months ago by Wietje110 • updated 3 months ago by chrchang5233.1k
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vcftools --freq output always zero
allele vcftools written 3 months ago by vinvan10 • updated 3 months ago by Kevin Blighe17k
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Vcf-compare two multi-sample vcf files
vcftools vcf-compare written 12 months ago by AB90 • updated 3 months ago by maduh1710
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How to update the INFO field of VCF after merging, subsetting?
vcf genome merge vcftools info written 3 months ago by kirannbishwa01780 • updated 3 months ago by jd10.work0
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Building Snpeff Database
gatk vcftools snp written 5.7 years ago by bioinfo680 • updated 3 months ago by rleach20
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Number of SNPs in VCF
vcftools snp written 4 months ago by bwczech0 • updated 4 months ago by Russ220
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Fill in missing VCF information with bcftools or vcftools or Vcf.pm
vcf annotation bcftools vcftools vcf.pm written 3.5 years ago by Lee Katz2.9k • updated 5 months ago by Biostar ♦♦ 20
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Problem installing vcftools
vcftools written 5 months ago by saltinimatteo980
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Recode vcf with specified reference allele
vcf vcftools plink flip reference allele written 5 months ago by wangdavid75810 • updated 5 months ago by Pierre Lindenbaum106k
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Filtering Vcf File
vcf indel vcftools snp written 5.7 years ago by bioinfo680 • updated 6 months ago by DataFanatic70
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The meaning of '0' allele frequency in vcftools output
vcf maf allele vcftools allele frequency written 7 months ago by Joel Wallenius10 • updated 6 months ago by Biostar ♦♦ 20
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