Showing: vcftoolsreset
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Best way to query VCF for specific variants
vcf annotation bcftools vcftools written 3.6 years ago by Sean180 • updated 15 days ago by bari.ballew160
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VCF merge or concatenate?
vcf vcftools snp written 4 weeks ago by rokragna2950 • updated 29 days ago by harish220
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vcftools counts output not written to file
vcf frequency vcftools snp counts written 3 months ago by spider_monkey10 • updated 4 weeks ago by Biostar ♦♦ 20
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help with vcftools filtering on individuals
vcftools written 23 months ago by schisler30 • updated 6 weeks ago by pduluth9610
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Installing Vcftools
vcftools written 7.1 years ago by nwaforcharles20 • updated 7 weeks ago by Biostar ♦♦ 20
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Linkage disequilibrium from multi-sample vcf file
vcf snpeff vcftools ld written 9 weeks ago by felipead6630 • updated 9 weeks ago by RamRS23k
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How To Separate Snp Variants From Indel Variants In The Same Vcf File
vcf vcftools written 8.4 years ago by Jianfengmao310 • updated 11 weeks ago by rodd50
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Updating allele frequency (AF) and minor allele frequency (MAF) INFO fields in .vcf
vcf imputation qc vcftools snp written 17 months ago by JSEM20 • updated 3 months ago by seta1.2k
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Tajima's D equation - VCFtools
tajima vcftools written 3 months ago by bwczech70
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Merge vcf files from Multiple Samples
vcf vcftools written 5.3 years ago by Ron970 • updated 4 months ago by Biostar ♦♦ 20
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How to add trio information to VCF or PED format (to compute Mendel error in Plink)
plink snp vcftools written 2.4 years ago by olavur100 • updated 4 months ago by Biostar ♦♦ 20
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How to detect outliers from either (a) SNP-Fst or (b) Window-Fst distributions?
fst vcftools written 4 months ago by serpalma.v20 • updated 4 months ago by h.mon26k
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Add rsid to LD output from vcftools
vcf snp ld vcftools written 3.8 years ago by jfertaj90 • updated 4 months ago by zx87547.9k
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VCFTOOLS won't read my vcf file
vcf vcftools snp written 5 months ago by wruzic10
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Splitting .vcf file
wgs vcftools written 5 months ago by F3.4k
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How to extract proxy SNPs using 1000G vcf for a list of SNPs
1000g proxy vcftools snp plink written 5 months ago by janhuang.cn150 • updated 5 months ago by chrchang5235.5k
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Convert VCFf file to plink ped/map format while filtering the SNPs
plink map ped vcftools written 4.9 years ago by roll290 • updated 5 months ago by hakimeazarafra0
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Allele frequency visualization
R stacks vcftools snp written 8 months ago by jaafari.omid50 • updated 5 months ago by msimmer92200
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