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--max-alleles argument not recognized
vcftools snp written 5.5 years ago by boris0 • updated 9 days ago by Biostar ♦♦ 20
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vcftools --fst-window- problems
fst-window vcftools written 6 weeks ago by florycamacho3050 • updated 28 days ago by fu_entomology20
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VCF tools --freq output file
vcftools allelefrequency fileformat written 9 weeks ago by Inquisitive8995170 • updated 9 weeks ago by Kevin Blighe65k
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vcftools discrepancy in mean depth values per site
vcf depth coverage snp vcftools written 11 weeks ago by oscarmirap10 • updated 11 weeks ago by Kevin Blighe65k
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Vcftools order of operations for filtering?
genome vcftools snp written 3 months ago by aj0 • updated 3 months ago by Pierre Lindenbaum130k
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How to filter a VCF file with a list of CHR or contig IDs?
vcf chromosome contigs vcftools awk written 3 months ago by lexic271310 • updated 3 months ago by drkennetz500
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From VCF, create only .tfam file
vcf vcftools tped tfam plink written 4.6 years ago by mpauper20 • updated 3 months ago by chrchang5237.3k
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Help On Merging Vcf Files By Using Vcftools
vcf merge vcftools written 9.7 years ago by Jianfengmao310 • updated 3 months ago by Biostar ♦♦ 20
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Split a large VCF into user defined regions
vcf vcftools sequencing written 4.0 years ago by zelia.worman0 • updated 6 months ago by nmzt430
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Filtering VCF file by INFO flag
vcf vcftools written 7 months ago by zhamouda0
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SnpMatrix from VCF file
vcf matrixeqtl snpmatrix vcftools eqtl written 3.5 years ago by Dhana80 • updated 7 months ago by cannilay20
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How to filter SNP and Indel under these criteria?
indel vcffilter freebayes vcftools snp written 10 months ago by r0062811210 • updated 8 months ago by devarora230
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VCFTools Removing Individuals and SNP counting
vcftools snp written 9 months ago by adnichols0 • updated 9 months ago by inedraylig20
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Why is VCFTools excluding so many SNPs in its Tajima D calculation?
vcftools snp population genetics written 10 months ago by Ace70 • updated 9 months ago by Biostar ♦♦ 20
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Calculate Fis (inbreeding coefficient)
vcftools snp written 14 months ago by mostafarafiepour80 • updated 10 months ago by ginushika0
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