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<prev • 247 results • page 1 of 9 • next >
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Filter SNPs on depth
filter depth vcftools snp mindp written 11 hours ago by Covux • 10 • updated 7 hours ago by Istvan Albert ♦♦ 71k
1
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1
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107
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1
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How to view the contents and header of a Vcf file in linux using VCFTOOLS
1000 genomes vcftools written 2 days ago by sridevi • 0 • updated 2 days ago by WouterDeCoster ♦ 19k
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92
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Comparing Genomes with VCFtools
genome vcftools written 13 days ago by marcus.grewal • 0
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1
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158
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1
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Intersect multiple VCF files
vcf bedtools intersect vcftools snp written 24 days ago by aagata.szymanek • 10 • updated 14 days ago by Brian Bushnell ♦ 12k
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1.2k
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Vcf Tools Error
tabix vcftools written 3.9 years ago by tpeters1213 • 0 • updated 24 days ago by Biostar ♦♦ 20
2
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1
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183
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1
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How to convert vcf file into data matrix for machine-learning?
vcf bcf machine-learning vcftools genotype written 5 weeks ago by jespinoz • 0
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87
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How to switch to an older version of vcftools
software error vcftools written 27 days ago by dpr331 • 0
2
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1
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87
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1
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help with Merging vcf files
vcf-merg vcftools written 29 days ago by abdulbenissa • 0 • updated 29 days ago by Pierre Lindenbaum ♦ 95k
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105
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Is the DGRP data phased?
vcf next-gen vcftools dgrp written 4 weeks ago by mufernando • 0
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103
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"Error: --recode 23 cannot be used with multi-character allele names." when converting VCF to 23andme
vcftools plink1.9 written 4 weeks ago by beneficii • 20
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convert vcf file (based using beagle) to ldhat input files when I have 6000 "chromosomes" (scaffolds)
vcftools ldhat format written 5 weeks ago by jc_jones • 0
2
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1
answer
141
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1
answer
Regular Expression help for (bcf/vcf)tools filter manipulation
bcftools vcftools written 5 weeks ago by morovatunc • 340 • updated 5 weeks ago by Petr Ponomarenko • 2.4k
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136
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1
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What's the difference between weighted Fst and mean Fst from VCFtools?
vcftools weighted fst mean fst written 6 weeks ago by coly_fu • 0
0
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1
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171
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1
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How to convert .vcf files into .csv?
vcf python csv vcftools sql written 9 weeks ago by feng9oly • 0 • updated 9 weeks ago by Pierre Lindenbaum ♦ 95k
3
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1
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177
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1
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Convert VCF 012 format to raw genotype data
snps vcftools genotypes written 11 weeks ago by mike1234 • 10
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1
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116
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1
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Problem with vcftools comparison, results dont make sense
comparison vcftools snp written 10 weeks ago by rafa.rios.50 • 40
1
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1
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214
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1
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Vcf-compare two multi-sample vcf files
vcftools vcf-compare written 10 weeks ago by AB • 60 • updated 10 weeks ago by Pierre Lindenbaum ♦ 95k
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119
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vcftools QC process
vcf qc vcftools sequencing written 11 weeks ago by chengyi31000 • 0
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1
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176
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1
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How to delete sample using vcftools
vcf delete sample vcftools written 11 weeks ago by chengyi31000 • 0 • updated 11 weeks ago by Philipp Bayer ♦ 4.3k
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141
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0
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vcftools - how to interpret .frq.count files?
allele frequency allele count vcftools written 12 weeks ago by spider_monkey • 0
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2
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1.3k
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2
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VCFTools weir-fst-pop on haploid organisms
weir-fst-pop haploid vcftools fst written 3.2 years ago by kawaiilain • 10 • updated 12 weeks ago by guillaume.rbt • 280
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140
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Remapping genomic coordinates to account for indels
vcf gatk vcftools written 3 months ago by jergosh • 50
5
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2
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232
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2
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how to cut the gz. file by chromosome
gz vcftools chr written 3 months ago by chengyi31000 • 0 • updated 3 months ago by Medhat • 6.5k
2
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1
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213
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1
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Filtering multisample vcf file by
vcftools genotype written 3 months ago by devin.porter92 • 0 • updated 3 months ago by Pierre Lindenbaum ♦ 95k
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0
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205
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Inconsistency in VCF and Plink format after conversion
vcftools plink written 3 months ago by olavur • 30
1
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1
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255
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1
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The bcftools/htslib VCF commands - Download and installation
bcftools vcftools sequencing written 3 months ago by chengyi31000 • 0 • updated 3 months ago by aham • 30
2
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1
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181
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1
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vcftools installation: vcftools/bin folder not created
vcf installation make vcftools configure written 3 months ago by spider_monkey • 0 • updated 3 months ago by Pierre Lindenbaum ♦ 95k
0
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2
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155
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2
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POS Length of 1000 genomes VCF
vcf 1000genomes vcftools written 3 months ago by sebastianvencken • 0 • updated 3 months ago by Mitch Bekritsky • 1.0k
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232
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1
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Comparision of two VCF file with vcftools. Chromosome order error message
vcf vcftools written 4 months ago by cmonat • 0
4
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3
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261
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3
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Filtering VCF file by INFO flag
vcf vcftools written 3 months ago by cl10101 • 40 • updated 3 months ago by Pierre Lindenbaum ♦ 95k
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