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Vegan beta diversity and permutation analysis
vegan R bioconducter written 6 months ago by Bioinfonext • 190
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NMDS plot for Amplicon 16s OTU count
vegan R bioconductor written 7 months ago by Bioinfonext • 190
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Microbiome data analysis using Vegan R tool
vegan microbiome written 16 months ago by MAPK • 1.5k • updated 15 months ago by Biostar ♦♦ 20
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Variation partitioning using latitude and longitude as explanatory variables
vegan R written 24 months ago by ieie • 10
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1.7k
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Stuck on calculating principal components
vegan R snp software error written 2.2 years ago by A • 3.7k • updated 2.2 years ago by pfs • 270
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Removal of rare OTUs before calculating community distances / ADONIS / NMDS
vegan microbiome 16s adonis nmds written 3.4 years ago by dmcleanuk • 0
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Replicates in Canonical Correspondence Analysis or PERMANOVA
vegan metabarcoding R written 3.5 years ago by lelle • 820
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How to plot UniFrac PCoA with 95% confidence Elipses in R
vegan R metagenomics phyloseq ordiellipse written 5.0 years ago by c.v.oflynn • 90 • updated 4.8 years ago by Biostar ♦♦ 20
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