Showing: vepreset
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4
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1
answer
144
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1
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Exac and gnomad MAF value in VCF
vcf annovar vep written 12 days ago by Sharon30 • updated 12 days ago by Pierre Lindenbaum99k
8
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3
answers
664
views
3
answers
Protein coding transcripts with vep
annotation vep variants written 19 months ago by onemoreuser0 • updated 22 days ago by Biostar ♦♦ 20
4
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1
answer
140
views
1
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SNP annotation with TFBS and histone marks
annotation tfbs histonemarks vep snp written 4 weeks ago by LNA10 • updated 4 weeks ago by Emily_Ensembl13k
4
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1
answer
336
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8 follow
1
answer
Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes ensemble vep vcf2maf written 4 months ago by eurioste20 • updated 7 weeks ago by Cyriac Kandoth4.7k
2
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1
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184
views
1
answer
4
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1
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182
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1
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Ensembl VEP 89 Output Format
ensembl vep written 8 weeks ago by bruce.moran320 • updated 8 weeks ago by Emily_Ensembl13k
0
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2
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238
views
5 follow
2
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VEP and Annovar Annotation
annovar vep written 12 weeks ago by BAGeno20
4
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2
answers
231
views
2
answers
How to filter mutant allele frequency in Variant Effect Predictor (VEP)?
perl vcf vep ensembl written 4 months ago by kin1820 • updated 4 months ago by EnsemblWill550
1
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0
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146
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0
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3
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0
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217
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0
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Forum: Survey for VEP users
ensembl survey variation vep forum written 5 months ago by Emily_Ensembl13k
2
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2
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295
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2
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2
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2
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380
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2
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LD calculation using LD plugin for VEP
linkage disequilibrium vep ld written 6 months ago by eXpander70 • updated 6 months ago by Ben_Ensembl470
2
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0
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350
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0
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1
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0
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419
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0
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3
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2
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1.2k
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2
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VEP failed to parse TBX_GENERIC error
ensembl vep snp variant effect predictor written 2.0 years ago by bruce.moran320 • updated 10 months ago by Yunling0
0
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1
answer
630
views
1
answer
1
vote
1
answer
454
views
1
answer
How do I get GO term annotations using VEP?
gene ensembl vep go ontology written 12 months ago by anp37580 • updated 10 months ago by Ben_Ensembl470
3
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1
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363
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1
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1
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1
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522
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1
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3
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0
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390
views
0
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5
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1
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2.1k
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1
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Trouble installing VEP
perl vep written 19 months ago by John60
0
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0
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427
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0
answers
0
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0
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535
views
0
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1
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1
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777
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1
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4
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2
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1.0k
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2
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Multiple VCF files and VEP
software error ensembl sequence vep snp written 2.4 years ago by dav0 • updated 14 months ago by Biostar ♦♦ 20
4
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1
answer
533
views
1
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Question about the consequence types from VEP
snps annotation consequence types vep written 15 months ago by vasilislenis70 • updated 15 months ago by Denise - Open Targets4.0k
0
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1
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407
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1
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2
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1
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561
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1
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VEP vs webserver Polyphen scores
polyphen annotation vep missense written 15 months ago by regrant10 • updated 15 months ago by Emily_Ensembl13k
0
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0
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489
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0
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Ensembl VEP cannot parse HGVS notation.
hgvs ensemble vep ref_seq parsing written 16 months ago by gmora10 • updated 16 months ago by Biostar ♦♦ 20
1
vote
0
answers
531
views
0
answers
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