Showing: vepreset
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4
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1
answer
77
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1
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IMPACT rating in VEP and compatibility with which tools?
impact rating vep written 12 days ago by Shicheng Guo7.5k • updated 12 days ago by Ben_Ensembl1.0k
0
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0
answers
172
views
0
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patients hg19 VEP Fasta and CACHE GRCh37
ensembl grch37 vep hg19 written 9 weeks ago by cocchi.e8920 • updated 16 days ago by Biostar ♦♦ 20
1
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0
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69
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0
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4
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1
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126
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1
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8
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4
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1.3k
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4
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Protein coding transcripts with vep
annotation vep variants written 3.3 years ago by onemoreuser10 • updated 6 weeks ago by abio0
3
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1
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162
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1
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3
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1
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167
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1
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3
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194
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1
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The content of variation (VEP) file from Ensembl
ensembl vep human written 8 weeks ago by seta1.2k • updated 8 weeks ago by Emily_Ensembl18k
2
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1
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168
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1
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1
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1
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169
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1
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VEP dbNSFP plugin GRCh37
ensembl anotation dbnsfp vep plugin written 9 weeks ago by cocchi.e8920 • updated 9 weeks ago by Emily_Ensembl18k
3
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1
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188
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1
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0
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0
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216
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VEP annotation of Manta BND
annnotation vep written 10 weeks ago by lindak0 • updated 10 weeks ago by Emily_Ensembl18k
7
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2
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505
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5 follow
2
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VEP output and stop gain mutation
ensembl vep stop gain written 7 months ago by seta1.2k • updated 3 months ago by zx87547.5k
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0
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455
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0
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Bio-DB-HTS installation and ensembl-vep
bio-db-hts vep ensembl written 3 months ago by felipead6630 • updated 3 months ago by Emily_Ensembl18k
3
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0
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218
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0
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14
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2
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408
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7 follow
2
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bcftools query missense_variant SNPs from gnomad VCF files
bcftools vep written 4 months ago by Shicheng Guo7.5k • updated 4 months ago by Emily_Ensembl18k
1
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1
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250
views
1
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Conserv CSQ and output plugin
ensembl vep csq written 5 months ago by robertclerc0 • updated 5 months ago by Emily_Ensembl18k
1
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1
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658
views
1
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Using VEP to get gnomAD frequencies
annotation frequency vep gnomad allele frequency written 5 months ago by brett.spurrier20 • updated 5 months ago by Emily_Ensembl18k
2
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1
answer
259
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1
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Annovar and VEP overlapp
annovar vep written 6 months ago by BAGeno130 • updated 6 months ago by Kevin Blighe44k
0
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1
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357
views
1
answer
Vep loftool threshold
loftool vep written 6 months ago by BAGeno130 • updated 6 months ago by Emily_Ensembl18k
7
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1
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445
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1
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9
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1
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317
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6 follow
1
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Assembly used in Variant Effect Predictor
ensembl vep snp written 7 months ago by Uday Rangaswamy120 • updated 7 months ago by Emily_Ensembl18k
4
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1
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318
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1
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10
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2
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474
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2
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Querying VEP using REST API
rest ensembl vep python R written 8 months ago by Arko20 • updated 8 months ago by Emily_Ensembl18k
5
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1
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727
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6 follow
1
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VEP- What is the best idea to start analyzing?
ensembl vep snp written 8 months ago by mostafarafiepour60 • updated 8 months ago by sadri.amirhossein10
21
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1
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1.2k
views
6 follow
1
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how to generate CNV plot from VEP results
cnv plot vep copy number alteration written 8 months ago by nazaninhoseinkhan360 • updated 8 months ago by Kevin Blighe44k
15
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3
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552
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7 follow
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Alternative to VEP.
vep snp written 9 months ago by joselu80 • updated 9 months ago by Emily_Ensembl18k
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1
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1.1k
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1
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Ensembl VEP cannot parse HGVS notation.
hgvs ensembl vep ref_seq parsing written 3.1 years ago by gmora20 • updated 9 months ago by zx87547.5k
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1
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1.5k
views
8 follow
1
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Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes vep vcf2maf ensembl written 2.0 years ago by eurioste20 • updated 9 months ago by zx87547.5k
1
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414
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