Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: wes • reset
or   Classic search
<prev • 120 results • page 1 of 4 • next >
0
votes
1
answer
50
views
1
answer
detecting LoH in non-cancer samples
loh next-gen wes written 13 days ago by clementine • 0 • updated 12 days ago by bernatgel • 2.2k
0
votes
0
answers
49
views
0
answers
CONTRA for CNV: lack of output images from CONTRA
normal exome wes contra cnv written 13 days ago by ogcmail • 0
0
votes
0
answers
76
views
0
answers
Normal sample variant calling method without PON ?
gatk wes mutect2 sequencing written 28 days ago by Igor Islanov • 0
1
vote
3
answers
1.5k
views
5 follow
3
answers
I need allele copy number information for running PyClone
wes whole-exome allele copy number written 2.3 years ago by a01039012387 • 10 • updated 4 weeks ago by firatuyulur • 290
1
vote
0
answers
90
views
0
answers
Call fusion genes from WES data
wes gene fusion written 5 weeks ago by Paso • 10
3
votes
0
answers
114
views
0
answers
Common variants discovery
gwas wes snp written 6 weeks ago by yehchan57 • 10
5
votes
1
answer
240
views
1
answer
Methods for Doing Consensus Variant Calling between multiple callers
consensus wes calling variant dna written 11 weeks ago by djevanclark • 40
0
votes
1
answer
107
views
1
answer
Compare results of test pipelines with the ones from GIAB
giab wes compare written 3 months ago by noff.polina • 0 • updated 3 months ago by finswimmer ♦ 12k
4
votes
1
answer
180
views
1
answer
Using Varscan without a matched normal
varscan wes written 3 months ago by sugus • 40 • updated 3 months ago by Chris Miller ♦ 21k
0
votes
0
answers
674
views
0
answers
NA values in q-end of chromosomes (segments.p)
dnacopy R wes cnv segment.p written 2.8 years ago by rmateos.1 • 10 • updated 4 months ago by Biostar ♦♦ 20
0
votes
0
answers
230
views
0
answers
Job: London LIDo PhD studentship
dna-array wes job rna-seq genomic biomarkers written 5 months ago by dxia • 0
0
votes
1
answer
598
views
1
answer
TCGA TMB: What exome size to use?
wes written 8 months ago by ngs_engineer • 0 • updated 5 months ago by bastien.nguyen • 0
3
votes
0
answers
351
views
0
answers
VarScan warning and exit after Invalid format for pileup at line 1
software error variant calling wes written 6 months ago by n.tear • 10 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
1.3k
views
1
answer
converting varscan2 output to sequenza
exome wes mutation snp written 2.2 years ago by a01039012387 • 10 • updated 5 months ago by brunobsouzaa • 50
0
votes
0
answers
307
views
0
answers
GATK4 VariantRecalibrator resource error
gatk4 ngs wes written 5 months ago by samreen.jasvi • 0
2
votes
0
answers
225
views
0
answers
EXCAVATOR shows 1 deletion which is not TRUE in IGV
exome excavator wes cnv igv written 6 months ago by lait • 140
2
votes
1
answer
285
views
1
answer
bionano hybrid scaffold
optical mapping wes bionano illumina written 6 months ago by lait • 140 • updated 6 months ago by WouterDeCoster ♦ 42k
2
votes
0
answers
989
views
0
answers
Mutect2 "somatic" variants with resistant tissue culture lines
gatk wes mutect2 variants genotyping written 7 months ago by shawn.w.foley • 1.1k • updated 6 months ago by Biostar ♦♦ 20
2
votes
2
answers
506
views
2
answers
CNVkit for somatic copy number detection
exome cnvkit wes cnv written 7 months ago by stephaniem • 0
0
votes
0
answers
142
views
0
answers
Tools to access variation of ploidy at certain genomic loci using WES
endomitosis wes ploidy written 6 months ago by Rahul Sharma • 600
0
votes
1
answer
262
views
1
answer
Can CVNkit call CNV correctly at HLA genes region?
cnvkit wes hla written 6 months ago by MatthewP • 290 • updated 6 months ago by linouhao • 0
3
votes
1
answer
269
views
1
answer
Post-filtering WES for mutation calling
wxs wes mutect2 written 7 months ago by graeme.thorn • 40
0
votes
0
answers
189
views
0
answers
How can I check my title of reads added by BWA mem -R?
wes bwa written 7 months ago by Laven9 • 0
3
votes
2
answers
832
views
6 follow
2
answers
Downstream analysis of VCF files obtained from VarScan2
vcf wes snpeff varscan2 somatic variations written 11 months ago by Raheleh • 90 • updated 7 months ago by bari.ballew • 190
8
votes
2
answers
404
views
2
answers
tool to detect large deletions
deletions wes igv written 7 months ago by lait • 140 • updated 7 months ago by bari.ballew • 190
0
votes
1
answer
1.6k
views
1
answer
Annovar - Mouse Exome Sequencing
annovar wes whole-exome sequencing mouse written 2.4 years ago by cbatist • 0 • updated 7 months ago by Kevin Blighe ♦ 51k
6
votes
1
answer
1.7k
views
1
answer
Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 3.0 years ago by Jerome Lin • 20 • updated 7 months ago by Biostar ♦♦ 20
7
votes
1
answer
258
views
7 follow
1
answer
Can you use germline variation calling on a normal embryonic stem cell line?
germline variation gatk wes snp embryonic cell written 7 months ago by maria2019 • 50 • updated 7 months ago by Emily_Ensembl ♦ 19k
0
votes
1
answer
344
views
1
answer
why does qualimap2 shows different results for number of mismatches for bowtie2 and BWAMEM?
bwamem bowtie2 wes qualimap written 7 months ago by maria2019 • 50 • updated 7 months ago by h.mon ♦ 28k
0
votes
1
answer
223
views
1
answer
Should I use the same reference indexing command of bwa for WGS and WES analysis?
indexing wes bwa mem wgs written 7 months ago by maria2019 • 50 • updated 7 months ago by finswimmer ♦ 12k
<prev • 120 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • Brazil, just now
  • Canada, just now
  • United States, 1 minute ago
  • Canada, 1 minute ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1843 users visited in the last hour