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<prev • 48 results • page 1 of 2 • next >
7
votes
1
answer
177
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6 follow
1
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WES or WGS analysis of cancer samples with no matched germline
wgs wes snv cnv written 11 days ago by Bogdan • 260 • updated 11 days ago by markus.riester • 180
2
votes
1
answer
121
views
1
answer
CNVkit GRCh38 tumor-normal pair
wes tcga grch38 cnv bed written 16 days ago by plink_9857 • 40 • updated 14 days ago by Eric T. • 1.7k
2
votes
0
answers
205
views
0
answers
Job: EARLY STAGE RESEARCHER at Ospedale San Raffaele, Laboratory of Human Genetics of Neurological Diseases, Neuroscience Division, Milan, Italy
next-gen pipeline neuropathic pain job sequencing wes written 4 weeks ago by silviasantoro17 • 20
1
vote
0
answers
135
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0
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What are the best tools/practices for CNV (structural variation) detection/analysis for Illumina family data?
sv wgs snp array wes cnv written 6 weeks ago by Irina Astrovskaya • 20
1
vote
1
answer
231
views
1
answer
SciClone on WES data
dnacopy varscan clonality wes sciclone written 11 weeks ago by mar.ark.parr • 30 • updated 7 weeks ago by Chris Miller ♦ 18k
0
votes
0
answers
104
views
0
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Annovar - Mouse Exome Sequencing
annovar wes whole-exome sequencing mouse written 7 weeks ago by cbatist • 0
1
vote
0
answers
253
views
0
answers
Job: Bioinformatics Scientist I, Childrens Hospital of Philadelphia, Philadelphia, PA, USA
next-gen job hpc wes rna-seq wgs written 7 weeks ago by komal.rathi • 2.9k
2
votes
1
answer
125
views
1
answer
Tumor Progress Study
wes written 8 weeks ago by haiying.kong • 160 • updated 8 weeks ago by Dan Gaston ♦ 6.8k
0
votes
0
answers
189
views
0
answers
Job: Senior Bioinformatician at Partners Personalized Medicine, Cambridge MA
python job wes machinelearning rna-seq wgs written 10 weeks ago by hns • 130
4
votes
1
answer
189
views
1
answer
Intersection of a BED genes with multiple VCFs: report only if at least N intersection.
bedtools vcf wes bed intersection written 10 weeks ago by badredda • 10 • updated 10 weeks ago by Alex Reynolds ♦ 19k
1
vote
1
answer
230
views
1
answer
The meaning of VAF and LOH in sciclone
sciclone wes vaf loh written 12 weeks ago by shiyang93 • 10 • updated 11 weeks ago by Chris Miller ♦ 18k
0
votes
0
answers
119
views
0
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How to find number of genes in Agilent Protocol
wes written 3 months ago by haiying.kong • 160 • updated 3 months ago by genomax ♦ 31k
0
votes
0
answers
184
views
0
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varScan2: can I use pooled normal when doing CNV calling?
cna wes varscan2 cnv written 3 months ago by pel67 • 0
3
votes
1
answer
211
views
1
answer
Where can I find a sample analysis pipeline for DNA?
wgs next-gen wes snp sequencing written 3 months ago by andrea • 0 • updated 3 months ago by geocarvalho • 20
1
vote
1
answer
260
views
1
answer
How to exclude noisy CNV from study?
dnacopy varscan copy number variation cnv wes written 4 months ago by rmateos.1 • 10 • updated 3 months ago by vchris_ngs • 3.6k
0
votes
0
answers
120
views
0
answers
Threshold for WES low coverage proportion
wes written 4 months ago by haiying.kong • 160
2
votes
1
answer
239
views
1
answer
analysis piplines for wes and wgs
wgs ngs wes pipeline assembly written 4 months ago by l.eit • 0 • updated 4 months ago by WouterDeCoster ♦ 20k
4
votes
2
answers
226
views
2
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WES reads mapping: RNASeq or DNASeq aligner?
alignment wes mapping written 5 months ago by user230613 • 240 • updated 5 months ago by cschu181 • 620
0
votes
0
answers
237
views
0
answers
NA values in q-end of chromosomes (segments.p)
dnacopy R wes cnv segment.p written 5 months ago by rmateos.1 • 10
3
votes
1
answer
358
views
1
answer
Full intronic deletions on a Whole-Exome Sequencing experiment
wes whole-exome sequencing cnv deletion written 5 months ago by bdelolmo • 10 • updated 5 months ago by trausch • 630
1
vote
0
answers
354
views
0
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QC for Whole Exome Sequence Data
wes written 6 months ago by haiying.kong • 160
2
votes
2
answers
296
views
2
answers
Difference between capture and WXS
wxs wes capture written 6 months ago by solo7773 • 50 • updated 6 months ago by Eric T. • 1.7k
0
votes
0
answers
240
views
0
answers
The impact of IndelRealigner in normal tumor paired exome sequencing
gatk next-gen wes alignment sequencing written 6 months ago by Jerome Lin • 20
2
votes
3
answers
413
views
6 follow
3
answers
Data repository for Whole Exome Sequencing
geo database wes written 7 months ago by Alejandro Jimenez Sanchez • 90
0
votes
1
answer
298
views
1
answer
Splice prediction from bam files
splicesite wes written 7 months ago by vigprasud • 50 • updated 7 months ago by WouterDeCoster ♦ 20k
1
vote
1
answer
575
views
6 follow
1
answer
Somatic Mutation Identification without Paired Normal Sample
wes written 7 months ago by haiying.kong • 160 • updated 7 months ago by Naga • 410
0
votes
0
answers
378
views
0
answers
sample swapping check with verifyBamID -- FREEMIX CHIPMIX
wes written 8 months ago by haiying.kong • 160 • updated 8 months ago by genomax ♦ 31k
6
votes
1
answer
481
views
1
answer
Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 8 months ago by Jerome Lin • 20 • updated 8 months ago by harold.smith.tarheel • 3.7k
0
votes
1
answer
626
views
1
answer
copyCat error (copyCat2)
wes copycat copycat2 cnv written 19 months ago by Jackie • 40 • updated 9 months ago by hongen.hugo.xu • 0
2
votes
1
answer
758
views
1
answer
statistical analysis of WES
ngs wes analysis cnv statistics written 16 months ago by natalia.fghf • 250 • updated 10 months ago by WouterDeCoster ♦ 20k
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