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<prev • 164 results • page 1 of 6 • next >
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110
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What does they mean by exome size here
wgs wes written 6 weeks ago by A • 3.9k
4
votes
1
answer
331
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1
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ACMG assignment tools
wgs wes acmg written 4 months ago by Eugene A • 80 • updated 7 weeks ago by Damianos P. Melidis • 30
2
votes
1
answer
145
views
1
answer
Visual summary from a collection of .vcf files (WES)
vcf wes summary visual variants written 8 weeks ago by Angel • 10
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0
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110
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0
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How to analyze multiple MAF files
wes maftools written 9 weeks ago by a.basitkhan1990 • 0
2
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1
answer
135
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1
answer
SNPs on a single transcript of a gene with multiple transcripts
gene wgs wes snp written 11 weeks ago by hkarakurt • 100 • updated 11 weeks ago by caggtaagtat • 1.3k
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1
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163
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1
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Is a compositional bias in Sequence Content of initial bases in WES reads normal?
wes sequence whole-exome-sequencing sequencing written 11 weeks ago by gerrit.bostelmann • 0
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121
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RoH for nonmodel species aligned to closely related reference (exomes)
exome wes nonmodel species roh written 11 weeks ago by eeheberlein • 0
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0
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169
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0
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GermlineCNVCaller- Interval scattering for WES data
gatk wes germlinecnvcaller cnv written 12 weeks ago by Z-F • 20
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0
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160
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0
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Getting huge size of CNV region from CNV-kit with hybrid data.
cnvkit wes cnv written 12 weeks ago by Makplus T • 70
2
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0
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145
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Exome data analysis
wes written 3 months ago by pg_canada • 0
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144
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0
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Simulating whole gene deletions for tuning a WES based CNV calling approach?
wes written 3 months ago by curious • 450
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2
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167
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2
answers
Quality check of NGS data
wgs ngs wes qc written 3 months ago by stanedav • 40 • updated 3 months ago by iraun • 3.8k
1
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1
answer
325
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1
answer
GATK Mutect2 Panel-Of-Normals generation
gatk panel-of-normal non-tumor wes mutect2 written 3 months ago by cocchi.e89 • 110 • updated 3 months ago by WouterDeCoster ♦ 44k
0
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116
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0
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VarAFT Analyze and Filtering Tool problem
varaft wes analyse tool written 4 months ago by qazwsx123 • 0
1
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0
answers
195
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0
answers
CNV callers for WES data
R next-gen cnv wes written 4 months ago by patelk26 • 130
0
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0
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221
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0
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How should I extract mutated genes from a VCF file?
exome gatk wes written 4 months ago by jrleary • 130
2
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1
answer
274
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1
answer
How much RAM / how many CPUs should I allocate for Mutect2?
wes written 5 months ago by jrleary • 130 • updated 5 months ago by steve • 2.6k
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1
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132
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1
answer
Questions regarding whole exome sequencing
wes sequencing written 5 months ago by nickhir • 10 • updated 5 months ago by Kevin Blighe ♦ 66k
2
votes
1
answer
233
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1
answer
Picard CollectSequencingArtifactMetrics error
picard wes written 5 months ago by jrleary • 130
1
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0
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217
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0
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mosdepth coverage so slow - fast way to get coverage of restricted regions WES
mosdepth exome wes coverage written 5 months ago by cocchi.e89 • 110 • updated 5 months ago by Biostar ♦♦ 20
0
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0
answers
194
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0
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Machine learning - NGS data
ngs wes ai machinelearning written 5 months ago by stanedav • 40
0
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0
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178
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0
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LOH segment inferring from WES data for germline sample
loh wes written 5 months ago by J.F.Jiang • 850
2
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1
answer
190
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1
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identify highly mutated regions in WES/WGS samples
wgs wes mutation hotspot written 5 months ago by cocchi.e89 • 110 • updated 5 months ago by igor ♦ 11k
0
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1
answer
252
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1
answer
Suggested pipeline to perform variant calling for cancer exome sequencing samples of PDX models
variant calling pdx wes liquid biopsy written 9 months ago by svlachavas • 680 • updated 6 months ago by akshayb04 • 20
4
votes
1
answer
124
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1
answer
Find covered regions in a set of BAM files
wes coverage written 6 months ago by German.M.Demidov • 1.8k
0
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0
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170
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0
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Pisces and Octopus on WES
variant calling pisces wes octopus written 6 months ago by newbio17 • 240
3
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2
answers
190
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2
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Different NGS runs for paired samples
exome ngs wes tumor-blood written 6 months ago by gab • 20 • updated 6 months ago by bruce.moran • 860
1
vote
1
answer
160
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1
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Reference of Whole exome sequecing analysis
variant calling ngs wes mutation bwa written 7 months ago by Shahzad • 10 • updated 7 months ago by lakhujanivijay ♦ 5.3k
5
votes
1
answer
185
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1
answer
Whole intron deletion?
sv ngs wes written 7 months ago by German.M.Demidov • 1.8k • updated 7 months ago by Pierre Lindenbaum ♦ 131k
0
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0
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170
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0
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Retrieving multiple regions (from a list) in a bam file and outputing as a table
data frame wes snp written 7 months ago by dodausp • 140
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