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<prev • 143 results • page 1 of 5 • next >
4
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58
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WGCNA threshold values
rnaseq wgcna threshold clustering written 8 hours ago by priyankaraina10 • 10 • updated 8 hours ago by Kevin Blighe ♦ 33k
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170
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0
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WGCNA soft thresholding problem
wgcna data normalization soft thresholding rna-seq written 6 days ago by catagui • 20
5
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1
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106
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1
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How to deal with the NAs in WGCNA trait file?
wgcna trait file nas written 6 days ago by BioLite • 20 • updated 6 days ago by Kevin Blighe ♦ 33k
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69
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How to prepare input data for DiffCoEx
wgcna transcriptome R written 8 days ago by Reza • 0
2
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1
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94
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1
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WGCNA for different comparisons
wgcna rna-seq written 4 weeks ago by user56 • 10
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70
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Problem with ModuleSignificance - how to filter genes?
wgcna modulesignificance written 4 weeks ago by user56 • 10 • updated 4 weeks ago by h.mon ♦ 21k
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169
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Is it okay to remove uncharacterised transcripts from downstream analysis in RNA-seq?
wgcna rna-seq dge written 11 weeks ago by antoinefelden • 20 • updated 5 weeks ago by Biostar ♦♦ 20
4
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423
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8 follow
1
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Eigen genes using WGCNA
wgcna eigengenes written 12 weeks ago by shivangi.agarwal800 • 40 • updated 6 weeks ago by Biostar ♦♦ 20
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3
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361
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8 follow
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R WGCNA - error in modulePreservation(): duplicated row.names not allowed
wgcna R written 10 weeks ago by feltrin88 • 0 • updated 6 weeks ago by jjt3f2188 • 0
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122
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How to define and use samples of WGCNA
wgcna written 8 weeks ago by afli • 140
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237
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Wgcna blockwisemodules: lower power results in modules with positive and negative kme values.
wgcna written 11 weeks ago by ductylerlv • 0 • updated 9 weeks ago by edammer • 0
0
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0
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210
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0
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WGCNA Co-expression network analysis on cuffdiff output
wgcna forum cuffdiff written 12 weeks ago by sbbinfo • 0
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285
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WGCNA error: "Error in cutreeDynamic"
software error wgcna next-gen rna-seq R written 10 weeks ago by giuseppe0525 • 20 • updated 10 weeks ago by WouterDeCoster ♦ 35k
1
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261
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WGCNA analysis in normal and tumor case
wgcna modules written 10 weeks ago by shivangi.agarwal800 • 40 • updated 10 weeks ago by Kevin Blighe ♦ 33k
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1
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146
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Applying WGCNA in multiple data types
wgcna correlation multiomics written 3 months ago by rin • 20 • updated 10 weeks ago by Kevin Blighe ♦ 33k
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94
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QUESTION: define RNA expression level of some genes as traits for WGCNA?
wgcna rna-seq written 10 weeks ago by giuseppe0525 • 20
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0
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218
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WGCNA's function goodSampleGenes
wgcna co-expression analysis rna-seq written 12 weeks ago by cgias • 0 • updated 10 weeks ago by Biostar ♦♦ 20
4
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1
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180
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1
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Different result from WGCNA tutorial I
wgcna written 11 weeks ago by afli • 140 • updated 11 weeks ago by Kevin Blighe ♦ 33k
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160
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Tips for network prediction: WGCNA vs ARACNE (or MINET)
wgcna network inference aracne written 11 weeks ago by piyushjo • 80
1
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1
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240
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1
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Estimating required memory for WGCNA analysis
R wgcna rna-seq coexpression written 12 weeks ago by klkeysb • 0 • updated 12 weeks ago by Kevin Blighe ♦ 33k
0
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1
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225
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1
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WGCNA exportNetworkToCytoscape issue!!
wgcna R written 3 months ago by b.g.tamang • 0
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254
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0
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WGCNA of RNA seq data, Error in function plotDendroAndColors
R rna-seq wgcna written 3 months ago by i.elshesheny • 0 • updated 3 months ago by Kevin Blighe ♦ 33k
2
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1
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702
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1
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Where to find WGCNA tutorials?
wgcna coexpression network written 3 months ago by BioNetwork • 0 • updated 3 months ago by Kevin Blighe ♦ 33k
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0
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181
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Why do I get -1 when I get softconnectivity in the WGCNA analysis
R rna-seq wgcna written 3 months ago by jaewoo.lee • 0
3
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1
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573
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1
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WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonferroni?
pearson wgcna network bicor written 3 months ago by jagoor93 • 0 • updated 3 months ago by Kevin Blighe ♦ 33k
9
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1
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407
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7 follow
1
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Problem for getting P-Value in Module-Trait Relationship in WGCNA
p-value wgcna network analysis written 3 months ago by modarzi • 60
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5 follow
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How to let WGCNA use multiple cores
wgcna parallel multe-thread written 19 months ago by syrttgump • 30 • updated 4 months ago by yplee614 • 0
0
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1
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350
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1
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WGCNA module interpretation question
wgcna co-expression network written 4 months ago by Alexie Li • 20 • updated 4 months ago by EagleEye ♦ 6.0k
0
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455
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1
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WGCNA::cor namespace issue
wgcna cor written 5 months ago by arjunsbaghela • 10
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180
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Consensus WGCNA: gene only of one data set present in modules
wgcna multiexpr rna-seq written 5 months ago by baldauf • 20
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