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<prev • 138 results • page 1 of 5 • next >
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Problem for finding "Locus Link ID" from Annotation file
locus link id annotation R wgcna written 8 weeks ago by modarzi • 20
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60
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How to define and use samples of WGCNA
wgcna written 8 days ago by afli • 20
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Wgcna blockwisemodules: lower power results in modules with positive and negative kme values.
wgcna written 28 days ago by ductylerlv • 0 • updated 11 days ago by edammer • 0
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WGCNA Co-expression network analysis on cuffdiff output
wgcna forum cuffdiff written 4 weeks ago by sbbinfo • 0
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6 follow
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R WGCNA - error in modulePreservation(): duplicated row.names not allowed
wgcna R written 24 days ago by feltrin88 • 0 • updated 17 days ago by peter.langfelder • 0
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WGCNA error: "Error in cutreeDynamic"
software error wgcna next-gen rna-seq R written 19 days ago by giuseppe0525 • 20 • updated 19 days ago by WouterDeCoster ♦ 32k
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150
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WGCNA analysis in normal and tumor case
wgcna modules written 19 days ago by shivangi.agarwal800 • 30 • updated 19 days ago by Kevin Blighe ♦ 30k
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Applying WGCNA in multiple data types
wgcna correlation multiomics written 5 weeks ago by rin • 20 • updated 21 days ago by Kevin Blighe ♦ 30k
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QUESTION: define RNA expression level of some genes as traits for WGCNA?
wgcna rna-seq written 21 days ago by giuseppe0525 • 20
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WGCNA's function goodSampleGenes
wgcna co-expression analysis rna-seq written 5 weeks ago by cgias • 0 • updated 23 days ago by Biostar ♦♦ 20
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143
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Different result from WGCNA tutorial I
wgcna written 4 weeks ago by afli • 20 • updated 29 days ago by Kevin Blighe ♦ 30k
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106
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Tips for network prediction: WGCNA vs ARACNE (or MINET)
wgcna network inference aracne written 4 weeks ago by piyushjo • 50
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Is it okay to remove uncharacterised transcripts from downstream analysis in RNA-seq?
wgcna rna-seq dge written 4 weeks ago by antoinefelden • 20
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Eigen genes using WGCNA
wgcna eigengenes written 4 weeks ago by shivangi.agarwal800 • 30 • updated 4 weeks ago by Kevin Blighe ♦ 30k
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Estimating required memory for WGCNA analysis
R wgcna rna-seq coexpression written 5 weeks ago by klkeysb • 0 • updated 4 weeks ago by Kevin Blighe ♦ 30k
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155
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WGCNA exportNetworkToCytoscape issue!!
wgcna R written 7 weeks ago by b.g.tamang • 0
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179
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WGCNA of RNA seq data, Error in function plotDendroAndColors
R rna-seq wgcna written 8 weeks ago by i.elshesheny • 0 • updated 8 weeks ago by Kevin Blighe ♦ 30k
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Where to find WGCNA tutorials?
wgcna coexpression network written 8 weeks ago by BioNetwork • 0 • updated 8 weeks ago by Kevin Blighe ♦ 30k
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Why do I get -1 when I get softconnectivity in the WGCNA analysis
R rna-seq wgcna written 8 weeks ago by jaewoo.lee • 0
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WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonferroni?
pearson wgcna network bicor written 9 weeks ago by jagoor93 • 0 • updated 9 weeks ago by Kevin Blighe ♦ 30k
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5 follow
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Problem for getting P-Value in Module-Trait Relationship in WGCNA
p-value wgcna network analysis written 9 weeks ago by modarzi • 20
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5 follow
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How to let WGCNA use multiple cores
wgcna parallel multe-thread written 18 months ago by syrttgump • 30 • updated 11 weeks ago by yplee614 • 0
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1
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209
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1
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WGCNA module interpretation question
wgcna co-expression network written 12 weeks ago by Alexie Li • 20 • updated 11 weeks ago by EagleEye ♦ 5.7k
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331
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WGCNA::cor namespace issue
wgcna cor written 3 months ago by arjunsbaghela • 10
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146
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Consensus WGCNA: gene only of one data set present in modules
wgcna multiexpr rna-seq written 3 months ago by baldauf • 20
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problem for constructing Topological Overlap Matrix (TOM) in WGCNA Algorithm
wgcna rna-seq topological overlap matrix written 3 months ago by modarzi • 20 • updated 3 months ago by WouterDeCoster ♦ 32k
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212
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Consensus WGCNA: differentially connected genes
wgcna rna-seq written 4 months ago by baldauf • 20 • updated 3 months ago by Biostar ♦♦ 20
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210
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1
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WGCNA network with condition and normal samples
wgcna network rna-seq written 3 months ago by saptarathideb • 0 • updated 3 months ago by Jake Warner • 670
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346
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Order of operations in RNAseq analysis
wgcna deseq2 rna-seq written 4 months ago by crouch.k • 10 • updated 4 months ago by Kevin Blighe ♦ 30k
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Problem for understanding the number of modules in construction network based on WGCNA algorithm
wgcna co-expression network written 4 months ago by modarzi • 20 • updated 4 months ago by Jake Warner • 670
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