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Filter VCF Variants from ROH File
wgs roh written 2 days ago by victorrigu0
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Downloading HLA typing for human
wgs neoantigen written 4 days ago by A3.9k • updated 3 days ago by ATpoint40k
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CNAs calling in tumor-normal WGS data
cna tumor-normal wgs written 8 days ago by German.M.Demidov1.8k • updated 8 days ago by non-bot30
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How to plot figure?
vcf wgs fst plot written 17 days ago by devarora240 • updated 16 days ago by genomax91k
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How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr cnv wgs written 7 months ago by Jordan1.2k • updated 6 weeks ago by Kevin Blighe66k
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What does they mean by exome size here
wgs wes written 6 weeks ago by A3.9k
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bwa mem -R (RGline) format for DNBseq fastq
wgs dnbseq bwa mem fastq bwa written 14 months ago by joe140 • updated 6 weeks ago by xxa0
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BBDuk aggressive ktrim on ancient DNA samples
ancient dna wgs bbmap adapter trimming written 7 weeks ago by ido.idobar10 • updated 7 weeks ago by genomax91k
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all coding regions .bed file hg38 Whole Genome Sequencing
wgs coding bed written 8 weeks ago by cocchi.e89110 • updated 8 weeks ago by Pierre Lindenbaum131k
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ACMG assignment tools
wgs wes acmg written 4 months ago by Eugene A80 • updated 8 weeks ago by Damianos P. Melidis30
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comparison of variants between WGS samples
wgs gatk differences human variants written 8 weeks ago by cocchi.e89110 • updated 8 weeks ago by harold.smith.tarheel4.6k
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GATK Mutect2 tumor mode
wgs tumor mutect2 human gatk written 8 weeks ago by cocchi.e89110
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Combining VCF files using GATK
vcf wgs gwas written 7 months ago by devarora240 • updated 8 weeks ago by niyomiw880
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How MetaPhlAn calculates relative abundance
wgs metaphlan written 3 months ago by dpc150 • updated 9 weeks ago by plicht0
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Converting VCF to CSV file
vcf wgs whole-genome sequencing csv genome written 10 weeks ago by Triple Nipple10 • updated 10 weeks ago by Kevin Blighe66k
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SNPs on a single transcript of a gene with multiple transcripts
gene wgs wes snp written 11 weeks ago by hkarakurt100 • updated 11 weeks ago by caggtaagtat1.3k
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BacPipe problem running GUI
genome assembly appjar wgs written 12 weeks ago by rajeefa10 • updated 12 weeks ago by genomax91k
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Detect sex chromosomes from WGS on a bird species (with reference genome)
wgs chromosomes written 8 months ago by beausoleilmo330 • updated 12 weeks ago by dalynoll0
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How to extract out specific distances from a distance matrix?
wgs phyloseq written 3 months ago by dpc150 • updated 3 months ago by antonioggsousa1.5k
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