0
votes
0
replies
45
views
2
votes
1
reply
200
views
3
votes
4
replies
233
views
2
votes
0
replies
154
views
2
votes
3
replies
127
views
0
votes
3
replies
166
views
2
votes
4
replies
181
views
1
vote
2
replies
284
views
updated 9 weeks ago by
Emily_Ensembl
22k
•
written 10 months ago by
graeme.thorn
▴
50
0
votes
0
replies
298
views
5
votes
6
replies
304
views
updated 4 months ago by
jared.andrews07
9.1k
•
written 4 months ago by
lefthandgergo
▴
10
10
votes
1
reply
1.3k
views
Tutorial:
introduce a tool for fast identification of SARS-CoV-2 and other microbes from sequencing data
6 months ago by
chen
★
2.1k
0
votes
0
replies
287
views
0
votes
0
replies
368
views
8 months ago by
recruitment
▴
10
0
votes
0
replies
335
views
8 months ago by
recruitment
▴
10
1
vote
1
reply
337
views
10 months ago by
demoraesdiogo2017
▴
40
2
votes
1
reply
507
views
1
vote
0
replies
239
views
10 months ago by
Astrid_Ensembl
▴
330
3
votes
1
reply
410
views
11 months ago by
karlynn.noble
▴
60
34
votes
22
replies
743
views
11 follow
updated 11 months ago by
JC
12k
•
written 11 months ago by
heididunst
▴
10
11
votes
7
replies
950
views
updated 12 months ago by
Brian Bushnell
17k
•
written 13 months ago by
Hernán
▴
200
11
votes
5
replies
1.5k
views
7
votes
2
replies
701
views
Recent Votes
Recent Locations •
All
New York, just now
Israel, just now
United States, 6 minutes ago
United States, 7 minutes ago
IISER Mohali, 8 minutes ago
Australia, 8 minutes ago
India, 8 minutes ago
Recent Awards •
All
Popular Question to
seta
★
1.5k
Popular Question to
Philipp Bayer
6.9k
Popular Question to
Kai_Qi
▴
100
Appreciated to
igor
12k
Popular Question to
9606
▴
320
Recent Replies
Answer: Expression of gene of interest across conditions in single-cell data
by
jared.andrews07
9.1k
Take a look at [dittoSeq](http://www.bioconductor.org/packages/release/bioc/vignettes/dittoSeq/inst/doc/dittoSeq.html) for viz options - it…
Comment: Extracting only tumor samples from Single cell RNASeq
by
jared.andrews07
9.1k
You need pre-defined variants for Vartrix. Typically it's used in conjuction with WGS/WES from bulk tissue to look for clonal variants in d…
Comment: Cell composition in each condition of single cell data
by
paria.alipour
▴
20
Oh, I'm sorry. I already posted it in here the https://www.biostars.org/p/457243/#9464486. I've added the images
Comment: How to convert Transcripts ID of rhesus monkey to Transcripts ID of homo sapiens
by
Quanyou
•
0
This seems OK when one gene generates only one transcirpt. But when one gene has multiple transcripts, these code would return a table wher…
Comment: How to convert Transcripts ID of rhesus monkey to Transcripts ID of homo sapiens
by
Quanyou
•
0
This seems feasible. But I want to convert tens of thousands of transcript IDs. Could you tell me how can I make it through sequene search?
Answer: bbmap, mapq and uniquelly mapped reads filtering
by
GenoMax
99k
Many threads exist that show how to extract uniquely mapped reads. Here are a couple of examples:<br>
https://www.biostars.org/p/276216/#27…
Comment: Cell composition in each condition of single cell data
by
rpolicastro
5.1k
The images seem to be missing from your post
Comment: Limma experiment design and making contrasts
by
kra277
•
0
Thank you very much for this. Much appreciated.
Comment: Limma experiment design and making contrasts
by
Kevin Blighe
72k
Hi, these follow the same principles as formulae used in regression modelling, so, you may want to focus on that (when searching). What lim…
Comment: Limma experiment design and making contrasts
by
kra277
•
0
That is very insightful. Thank you very much for the answer. Also, if I may ask, could you please point me to the articles for understandin…
Comment: Keep values from VCF file into Ensembl VEP annotation
by
brunobsouzaa
▴
510
Thanks Man... I've wroten a simple awk command for this task! Everything is working fine.
Comment: Raw read processing using trimmomatic
by
boczniak767
▴
740
Do you have exact command used by the author? I guess that not all details was presented in the paper. You can always ask the corresponding…
Comment: should stop codon be counted as part of CDS
by
sullis02
•
0
Your github page appears to live here now
https://github.com/NBISweden/GAAS/blob/master/annotation/knowledge/gxf.md
Comment: How do I compare degree and betweenness centrality for different PPI networks?
by
Istvan Albert
87k
I am not all that knowledgeable of Cytoscapes features and scripting capabilities,
but if it does not support that operation you can expo…
Comment: Creating reference genome for mapping and then selecting
by
Istvan Albert
87k
you would get the counts as you would get them in any other case, how do you know something maps to chromosome 1 of human genome? Because i…
Traffic: 1321 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6