Limit : all time
all time today this week this month this year
46 results • Page 1 of 1
Sort: Rank
Rank Views Votes Replies
Filtering for tag: CRISPR • reset
0
votes
0
replies
166
views
Job: Job: CRISPR Microbiome Bioinformatician
CRISPR microbiome job bioinformatician denmark Job
4 weeks ago by evanderhelm • 0
1
vote
3
replies
187
views
How do you design primers with sequencing adapters to amplify CRISPR-edited regions?
primer-design crispr primer3
updated 4 weeks ago by • 0 • written 5 weeks ago by ▴ 10
1
vote
3
replies
941
views
What tools do you use to find the potential off-target sites when designing Cas9/Cas12 RNA-guided endonucleases?
CRISPR off-target alignment
5 weeks ago by genomics0101 ▴ 10
0
votes
0
replies
264
views
Human GeCKO library validation
CRISPR Library sgRNA GeCKO v2
3 months ago by mansisharma.iisc • 0
0
votes
0
replies
543
views
Job: Research assistant for Biotech Project at the Novo Nordisk Foundation Center for Biosustainability (CfB), Technical University of Denmark
CRISPR molecular biology DNA Job
5 months ago by info ▴ 60
0
votes
0
replies
520
views
Job: Staff Scientist, Ph.D., or Postdoctoral Position in Bioinformatics
RNA-Seq ChIP-Seq Cancer Epigenetics CRISPR Job
5 months ago by Gjain 5.6k
3
votes
5
replies
320
views
CRISPR/Cas9 screen analysis: reads R1 and R2 mixed
crispr screen reads illumina sequencing
8 months ago by Swimming bird ▴ 20
0
votes
2
replies
1.2k
views
How to retrieve all hmm from TIGRFAM for Cas (CRISPR-associated) proteins?
hmm Cas CRISPR
updated 12 months ago by 20 • written 4.1 years ago by ▴ 170
1
vote
5
replies
301
views
RNAseq Design Help
RNA-Seq DESeq2 R crispr cas9
13 months ago by tropeedward • 0
1
vote
0
replies
444
views
Job: PhD studentship in CRISPR bioinformatics and cancer genomics
sequencing next-gen CRISPR Cancer LncRNA Job
13 months ago by rory.johnson ▴ 20
0
votes
0
replies
212
views
about the design of guideRNA for CRISPRko/ CRISPRi/ CRISPRa
CRISPR
14 months ago by Bogdan ★ 1.1k
2
votes
7
replies
313
views
How to identify 100ish deletion from NGS data
CRISPR targeted sequencing
14 months ago by haewon • 0
1
vote
6
replies
600
views
Extract gRNA sequence using cutadapt
cutadapt trimming crispr sequencing
16 months ago by Swimming bird ▴ 20
0
votes
0
replies
325
views
News: Webinar: Single Cell Multi-omics Data Analysis in Partek Flow - Visualization of CRISPR Data
single cell bioinformatics CRISPR News
17 months ago by kgosche ▴ 30
9
votes
7
replies
1.7k
views
7 follow
Fix FoxG1 deletion in my son using CRISPR
FoxG1 CRISPR cure
updated 18 months ago by 20 • written 5.0 years ago by ▴ 10
0
votes
4
replies
443
views
GUIDEseq data links dead in github
GUIDEseq github Cas9 CRISPR guideseq
18 months ago by joe ▴ 180
1
vote
0
replies
291
views
CRISPR off-target validation with GUIDEseq
Cas9 GUIDEseq CIRCLEseq CRISPR
19 months ago by joe ▴ 180
0
votes
0
replies
339
views
News: Interested in learning more about CRISPR Genome Editing?
CRISPR GenomeEditing News
19 months ago by carlopecoraro2 ★ 2.0k
2
votes
0
replies
350
views
News: Course: Approaches and Computational tools for CRISPR Genome editing
CRISPR GenomeEditing News
21 months ago by carlopecoraro2 ★ 2.0k
2
votes
1
reply
2.5k
views
How to interpret CERES gene scores for genome wide CRISPR-Cas9 knockout screens?
CRISPR
22 months ago by patelk26 ▴ 230
0
votes
0
replies
550
views
News: CRISPR Genome Editing
genome CRISPR News
2.0 years ago by carlopecoraro2 ★ 2.0k
1
vote
0
replies
804
views
Job: Global Bioinformatics Manager - Horizon Discovery, Lafayette Colorado
RNA-Seq next-gen CRISPR gene editing siRNA Job
2.1 years ago by shawn.mek ▴ 10
0
votes
2
replies
554
views
What is the best way to costract a Crispr library
crispr library sgRNA
2.2 years ago by Assa Yeroslaviz ★ 1.5k
9
votes
3
replies
1.8k
views
Install CRISPRCasFinder under Ubuntu without having administrator rights
install crispr linux
updated 2.4 years ago by 45k • written 2.4 years ago by ▴ 70
0
votes
3
replies
2.4k
views
RIGER extension in GENE-E
sequencing next-gen crispr Gene Ranking
updated 2.5 years ago by ▴ 10 • written 3.6 years ago by • 0
0
votes
1
reply
810
views
Looking CRISPR-Cas9 sequencing Data
sequencing crispr ngs
2.8 years ago by bi_Scholar • 0
0
votes
1
reply
624
views
Analyzing CRISPR and RNAi genome wide screens
CRISPR RNAi meta analysis
2.8 years ago by spacemorrissey ▴ 240
1
vote
4
replies
933
views
Newbie Question: How to find overlap of multiple cellline datas
ngs overlap CRISPR
updated 2.8 years ago by 20 • written 3.7 years ago by ▴ 50
4
votes
9
replies
968
views
Genome-wide CRISPR/Cas9 and gene expression?
crispr cas9 microarray gene expression
updated 2.9 years ago by 11k • written 3.0 years ago by ▴ 150
1
vote
1
reply
846
views
Job: DIRECTOR of COMPUTATIONAL BIOLOGY, Cedilla Therapeutics, Cambridge, MA, USA
CRISPR Oncology High Throughput Sequencing Job
updated 2.9 years ago by 99k • written 2.9 years ago by ▴ 10
0
votes
0
replies
883
views
Job: Post-doc positions on non-coding RNAs in neurological diseases at RIKEN Yokohama Japan
single cell CRISPR lncRNA GWAS Job
2.9 years ago by chungchau.hon ▴ 10
0
votes
0
replies
550
views
How to analyse data from genetic screening followed by NGS ?
screening gene-trapping gRNA crispr DE-analysis
3.1 years ago by Assa Yeroslaviz ★ 1.5k
1
vote
1
reply
780
views
crispr mageck analysis ,Sam library
genome Crispr library Sam
updated 3.3 years ago by 135k • written 3.3 years ago by • 0
2
votes
0
replies
1.3k
views
CRISPR screening analysis using mageck
mageck crispr screening reads
3.6 years ago by Folder40g ▴ 140
12
votes
4
replies
1.1k
views
Forum: Update: CRISPR off-target effects causing unexpected mutations - good science or media hype?
CRISPR off target Forum
3.8 years ago by YaGalbi ★ 1.5k
1
vote
5
replies
935
views
How to find which residues in a protein which are targetable by CRISPR
genome gene crispr cas9
updated 3.9 years ago by ▴ 570 • written 3.9 years ago by ▴ 10
0
votes
0
replies
1.9k
views
Job: Computational Postdoc positions available Harvard Medical School/Massachusetts General Hospital
MACHINE LEARNING SINGLE CELL EPIGENOMICS CRISPR Job
4.0 years ago by lucapinello • 0
0
votes
3
replies
833
views
CRISPR repeat identification tool comparison
alignment blast crispr
updated 4.1 years ago by 32k • written 4.1 years ago by ▴ 70
1
vote
0
replies
1.6k
views
Job: Postdoc HighDimensional Statistical Modelling in Multi-Omics and Drug Development at EMBL Germany
CRISPR RNA-Seq ChIP-Seq Job
4.5 years ago by EMBL Recruitment ▴ 20
0
votes
1
reply
2.3k
views
CRISPR screen Trimming with mageck low mappability
crispr screen trimming mapping
updated 4.6 years ago by 20 • written 4.7 years ago by ▴ 470
0
votes
0
replies
1.0k
views
How to favor consistently occurring rare event in CRISPR screen analysis
CRISPR
4.6 years ago by morovatunc ▴ 470
0
votes
0
replies
2.1k
views
How to confirm correct integration of a reporter using the CRISPR/Cas9 mediated homology-repair DNA pathway?
CRISPR sequencing
4.7 years ago by Andrea ▴ 10
1
vote
0
replies
1.8k
views
Job: Postdoctoral Fellow - Statistical Computing in Multi-Omics and Personalized Medicine, Heidelberg, Germany
CRISPR R phenotype genotype Job
4.7 years ago by EMBL Recruitment ▴ 20
3
votes
0
replies
1.4k
views
Job: Computational Biologist at Intellia Therapeutics in Cambridge MA
CRISPR genomics genome editing Job
4.7 years ago by reynald.lescarbeau ▴ 50
0
votes
0
replies
1.5k
views
Job: Postdoc - Statistical Computing in Multi-Omics and Drug Development , Heidelberg, Germany
proetomics CRISPR C R Job
updated 4.7 years ago by 99k • written 4.7 years ago by ▴ 20
0
votes
0
replies
1.5k
views
Job: Postdoctoral position studying the systems biology of cancer progression at Cold Spring Harbor Laboratory
cancer TCGA systems biology CRISPR postdoc Job
5.0 years ago by sheltzer • 0
46 results • Page 1 of 1
Recent Votes
Answer: How to visualize Multiple Sequence Alignment with python ?
Answer: How to visualize Multiple Sequence Alignment with python ?
Comment: RNA-SEQ count data as input for Machine Learning
Answer: RNA-SEQ count data as input for Machine Learning
A: Could you explain the difference between STAR, KALLISTO, SALMON etc. to experime
Answer: What Do You Waste Your Time On
C: What Do You Waste Your Time On
Recent Locations • All
Lithuania, just now
Hong Kong, just now
University Park, USA, 3 minutes ago
Canada, 3 minutes ago
Universe, 4 minutes ago
Hyderabad India, 4 minutes ago
Paris, 5 minutes ago
Recent Awards • All
Popular Question to 9606 ▴ 320
Great Question to Mehmet ▴ 670
Popular Question to biobiu ▴ 120
Teacher to andrew.j.skelton73 6.2k
Teacher to Jean-Karim Heriche 24k
Scholar to Devon Ryan 98k
Supporter to David_emir ▴ 390
Recent Replies
Answer: How to visualize Multiple Sequence Alignment with python ? by Mensur Dlakic ★ 10k
Can't think of a particularly good alignment viewer in python. If you are more interested in result rather than doing it in python, ther…
Comment: Using outgroup in gene family dendograms by Mensur Dlakic ★ 10k
> Wouldn't a gene that isn't an ABC superfamily member from some distant species suffice as an outgroup candidate here? Most definitely no…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database by Istvan Albert 87k
with that definition I would suspect that all of your sequences are "dependent", I would expect every functional DNA/RNA region to capture …
Comment: Taxonomy assignment of viral RNA by biobiu ▴ 120
Thanks! As for the blast option- (1) so do you suggest to just blast the contig against a db of viral RNAs? and (2) is there a comprehensiv…
Comment: Finding how many times a nucleotide appear in the same position by cpad0112 15k
#!/usr/bin/env python3 sequences = ["GAGGTAAACTCTG", "TCCGTAAGTTTTC", "CAGGTTGGAACTC", "ACAGTCAGTTCAC", "TAGGTCATTACAG", "TAGG…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database by Anand Rao ▴ 350
Thanks for your reply. Yes, I think I could have explained my problem much better, but rather than change my original post, I will add some…
Answer: Finding how many times a nucleotide appear in the same position by Dunois ▴ 610
Here's a little `python` function you can work off of: def count_quer_at_pos_in_seq(seqs, quer = "A"): #Initialize a list…
Comment: Using outgroup in gene family dendograms by Rogerio Ribeiro ▴ 50
Thank for the fast reponse. The ABC family is not the best example for this question indeed. The objective of my work is to find genes resp…
Answer: Taxonomy assignment of viral RNA by Zhilong Jia ★ 1.7k
1. Blast directly 2. [IDSeq][1], can get viral contigs and their annotation directly. [IDSeq : An open-source cloud-based pipeline and…
Comment: Finding how many times a nucleotide appear in the same position by hugo.avila ▴ 180
Hi, It is not a norm but it is a good practice to post an attempted resolution first and then other members try to correct it or suggest an…
Comment: What Do You Waste Your Time On by ponganta ▴ 160
Aye to the rushed analyses and the last-minute documentation. Horrible, but somehow it happens all the time.
Answer: What Do You Waste Your Time On by ponganta ▴ 160
Reinventing the wheel. Like, all the time. Why use clusterProfiler with an up-to-date GO-annotation, when you can just write your own clien…
Comment: RNAseq data analysis of pooled data by ponganta ▴ 160
By "pooled" data, do you mean data from tissue-specific bulk-RNAseq? Or did you pool single cell (SC) RNAseq-libraries?
Comment: RNAseq data analysis of pooled data by Dunois ▴ 610
What exactly do you mean by "pooled" data?
Answer: RNAseq data analysis of pooled data by grant.hovhannisyan ★ 2.1k
I made a tutorial last year for University students on this topic https://www.loom.com/share/a55c1dedb8e64e7cac47f6595b751de7. Let me know …
Traffic: 1480 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6