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Showing top results for tag: CRISPR • reset
0
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0
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4
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  Mitochondrial targeting sequence
mts crispr geneediting gene Sequence
24 minutes ago by chiti.agarwal • 0
0
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0
replies
51
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  Analysis of CRISPR screening with very strong positive selection
MAGeCK CRISPR
12 days ago by di4mond • 0
1
vote
3
replies
196
views
  How to Align multiple short reads (NGS data) to a short (~200bp) reference?
genomics NGS CRISPR genotyping
updated 2 days ago by 34k • written 27 days ago by • 0
1
vote
2
replies
150
views
  need help
microalgae bioremediation CRISPR Cas9
updated 6 weeks ago by 103k • written 6 weeks ago by • 0
0
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1
reply
188
views
  gRNA concatamer - will it work ?
gRNA CRISPR PAM
updated 9 weeks ago by 50k • written 9 weeks ago by • 0
0
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0
replies
169
views
Job:  Research assistant for yeast natural products project at DTU Biosustain
yeast preps DNA DTU Biosustain CRISPR
9 weeks ago by info ▴ 60
0
votes
0
replies
217
views
Job:  Job: CRISPR Microbiome Bioinformatician
CRISPR microbiome job bioinformatician denmark Job
3 months ago by evanderhelm • 0
1
vote
3
replies
220
views
  How do you design primers with sequencing adapters to amplify CRISPR-edited regions?
primer-design crispr primer3
updated 3 months ago by • 0 • written 3 months ago by ▴ 10
1
vote
3
replies
991
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  What tools do you use to find the potential off-target sites when designing Cas9/Cas12 RNA-guided endonucleases?
CRISPR off-target alignment
3 months ago by genomics0101 ▴ 10
0
votes
0
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356
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  Human GeCKO library validation
CRISPR Library sgRNA GeCKO v2
6 months ago by mansisharma.iisc • 0
0
votes
0
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595
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Job:  Research assistant for Biotech Project at the Novo Nordisk Foundation Center for Biosustainability (CfB), Technical University of Denmark
CRISPR molecular biology DNA Job
7 months ago by info ▴ 60
0
votes
0
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574
views
Job:  Staff Scientist, Ph.D., or Postdoctoral Position in Bioinformatics
RNA-Seq ChIP-Seq Cancer Epigenetics CRISPR Job
7 months ago by Gjain 5.6k
3
votes
5
replies
422
views
  CRISPR/Cas9 screen analysis: reads R1 and R2 mixed
crispr screen reads illumina sequencing
11 months ago by Swimming bird ▴ 20
0
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2
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1.2k
views
  How to retrieve all hmm from TIGRFAM for Cas (CRISPR-associated) proteins?
hmm Cas CRISPR
updated 14 months ago by 20 • written 4.3 years ago by ▴ 170
1
vote
5
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352
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  RNAseq Design Help
RNA-Seq DESeq2 R crispr cas9
15 months ago by tropeedward • 0
1
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0
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483
views
Job:  PhD studentship in CRISPR bioinformatics and cancer genomics
sequencing next-gen CRISPR Cancer LncRNA Job
15 months ago by rory.johnson ▴ 20
0
votes
0
replies
253
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  about the design of guideRNA for CRISPRko/ CRISPRi/ CRISPRa
CRISPR
16 months ago by Bogdan ★ 1.1k
2
votes
7
replies
354
views
  How to identify 100ish deletion from NGS data
CRISPR targeted sequencing
16 months ago by haewon • 0
1
vote
6
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729
views
  Extract gRNA sequence using cutadapt
cutadapt trimming crispr sequencing
19 months ago by Swimming bird ▴ 20
0
votes
0
replies
366
views
News:  Webinar: Single Cell Multi-omics Data Analysis in Partek Flow - Visualization of CRISPR Data
single cell bioinformatics CRISPR News
19 months ago by kgosche ▴ 30
9
votes
7
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1.7k
views
7 follow
  Fix FoxG1 deletion in my son using CRISPR
FoxG1 CRISPR cure
updated 21 months ago by 20 • written 5.2 years ago by ▴ 10
0
votes
4
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484
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  GUIDEseq data links dead in github
GUIDEseq github Cas9 CRISPR guideseq
21 months ago by joe ▴ 200
1
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0
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339
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  CRISPR off-target validation with GUIDEseq
Cas9 GUIDEseq CIRCLEseq CRISPR
21 months ago by joe ▴ 200
0
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0
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373
views
News:  Interested in learning more about CRISPR Genome Editing?
CRISPR GenomeEditing News
22 months ago by carlopecoraro2 ★ 2.0k
2
votes
0
replies
402
views
News:  Course: Approaches and Computational tools for CRISPR Genome editing
CRISPR GenomeEditing News
24 months ago by carlopecoraro2 ★ 2.0k
2
votes
1
reply
2.9k
views
  How to interpret CERES gene scores for genome wide CRISPR-Cas9 knockout screens?
CRISPR
2.0 years ago by patelk26 ▴ 230
0
votes
0
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587
views
News:  CRISPR Genome Editing
genome CRISPR News
2.2 years ago by carlopecoraro2 ★ 2.0k
1
vote
0
replies
872
views
Job:  Global Bioinformatics Manager - Horizon Discovery, Lafayette Colorado
RNA-Seq next-gen CRISPR gene editing siRNA Job
2.3 years ago by shawn.mek ▴ 10
0
votes
2
replies
596
views
  What is the best way to costract a Crispr library
crispr library sgRNA
2.4 years ago by Assa Yeroslaviz ★ 1.6k
9
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3
replies
1.9k
views
  Install CRISPRCasFinder under Ubuntu without having administrator rights
install crispr linux
updated 2.6 years ago by 45k • written 2.6 years ago by ▴ 70
0
votes
3
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2.5k
views
  RIGER extension in GENE-E
sequencing next-gen crispr Gene Ranking
updated 2.7 years ago by ▴ 10 • written 3.8 years ago by • 0
0
votes
1
reply
851
views
  Looking CRISPR-Cas9 sequencing Data
sequencing crispr ngs
3.0 years ago by bi_Scholar • 0
0
votes
1
reply
660
views
  Analyzing CRISPR and RNAi genome wide screens
CRISPR RNAi meta analysis
3.0 years ago by spacemorrissey ▴ 260
1
vote
4
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989
views
  Newbie Question: How to find overlap of multiple cellline datas
ngs overlap CRISPR
updated 3.0 years ago by 20 • written 3.9 years ago by ▴ 50
4
votes
9
replies
1.0k
views
  Genome-wide CRISPR/Cas9 and gene expression?
crispr cas9 microarray gene expression
updated 3.1 years ago by 11k • written 3.2 years ago by ▴ 150
1
vote
1
reply
899
views
Job:  DIRECTOR of COMPUTATIONAL BIOLOGY, Cedilla Therapeutics, Cambridge, MA, USA
CRISPR Oncology High Throughput Sequencing Job
updated 3.1 years ago by 103k • written 3.1 years ago by ▴ 10
0
votes
0
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930
views
Job:  Post-doc positions on non-coding RNAs in neurological diseases at RIKEN Yokohama Japan
single cell CRISPR lncRNA GWAS Job
3.1 years ago by chungchau.hon ▴ 10
0
votes
0
replies
579
views
  How to analyse data from genetic screening followed by NGS ?
screening gene-trapping gRNA crispr DE-analysis
3.3 years ago by Assa Yeroslaviz ★ 1.6k
1
vote
1
reply
828
views
  crispr mageck analysis ,Sam library
genome Crispr library Sam
updated 3.5 years ago by 136k • written 3.5 years ago by • 0
2
votes
0
replies
1.3k
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  CRISPR screening analysis using mageck
mageck crispr screening reads
3.8 years ago by Folder40g ▴ 150
12
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4
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1.2k
views
Forum:  Update: CRISPR off-target effects causing unexpected mutations - good science or media hype?
CRISPR off target Forum
4.0 years ago by YaGalbi ★ 1.5k
1
vote
5
replies
983
views
  How to find which residues in a protein which are targetable by CRISPR
genome gene crispr cas9
updated 4.1 years ago by ▴ 570 • written 4.1 years ago by ▴ 10
0
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0
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2.0k
views
Job:  Computational Postdoc positions available Harvard Medical School/Massachusetts General Hospital
MACHINE LEARNING SINGLE CELL EPIGENOMICS CRISPR Job
4.2 years ago by lucapinello • 0
0
votes
3
replies
871
views
  CRISPR repeat identification tool comparison
alignment blast crispr
updated 4.3 years ago by 32k • written 4.3 years ago by ▴ 70
1
vote
0
replies
1.6k
views
Job:  Postdoc HighDimensional Statistical Modelling in Multi-Omics and Drug Development at EMBL Germany
CRISPR RNA-Seq ChIP-Seq Job
4.7 years ago by EMBL Recruitment ▴ 20
0
votes
1
reply
2.4k
views
  CRISPR screen Trimming with mageck low mappability
crispr screen trimming mapping
updated 4.8 years ago by 20 • written 4.9 years ago by ▴ 470
0
votes
0
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1.1k
views
  How to favor consistently occurring rare event in CRISPR screen analysis
CRISPR
4.8 years ago by morovatunc ▴ 470
0
votes
0
replies
2.3k
views
  How to confirm correct integration of a reporter using the CRISPR/Cas9 mediated homology-repair DNA pathway?
CRISPR sequencing
4.9 years ago by Andrea ▴ 10
1
vote
0
replies
1.9k
views
Job:  Postdoctoral Fellow - Statistical Computing in Multi-Omics and Personalized Medicine, Heidelberg, Germany
CRISPR R phenotype genotype Job
4.9 years ago by EMBL Recruitment ▴ 20
3
votes
0
replies
1.4k
views
Job:  Computational Biologist at Intellia Therapeutics in Cambridge MA
CRISPR genomics genome editing Job
4.9 years ago by reynald.lescarbeau ▴ 50
50 results • Page 1 of 1
Recent Votes
C: Blast - Formatting Output
C: Blast - Formatting Output
Blast - Formatting Output
tools for identifying mitochondrial-targeting sequence in different proteins
A: tools for identifying mitochondrial-targeting sequence in different proteins
How to work with Level 3 data (RPKM values) from TCGA database
A: How to work with Level 3 data (RPKM values) from TCGA database
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Recent Replies
Comment: Divide the genome to vary lengths windows in R by rrapopor ▴ 30
I added to the question.
Answer: tools for identifying mitochondrial-targeting sequence in different proteins by chiti.agarwal • 0
I am trying to find the MTS for my mitochondrial gene of a fungus. Do you know any tools for that? I Also I am not sure if MTS transport…
Comment: How to estimate polygenic risk score (PRSs) using the scoring files from PGSCata by zx8754 10k
PGSCatalog has all you need to calculate the score, if individual has the effect allele then multiply it with beta, do the same for all SNP…
Comment: Divide the genome to vary lengths windows in R by ATpoint 50k
Can you add a representative example?
Comment: How to create PSSM matrix by Somayeh • 0
Hi. How to get pssm matrix ? Thank you.
Comment: RNAseq analysis for aspergillus niger ? by najibveto ▴ 40
thank you, just the person who generated this data isn’t around anymore. is there a tutorial for similar analysis?
Comment: Snakemake error: "Removing output files of failed job since they might be corru by kamanovae ▴ 30
Thank you! But when I run just such a command, the result is not written to the output file, but displayed on the screen. I do not understa…
Comment: Snakemake error: "Removing output files of failed job since they might be corru by kamanovae ▴ 30
Thank you for your answer! When I run the command outside of the snakemake, everything works and I get the required output files. I think…
Comment: Quadruplex sequence batch prediction by isha.lily20 • 0
Hi Qi Zhao and dariober, can u plz help me with my intern project , i have to count total number of this regular expression ?
Comment: Creating Annotation GTF/GFF file by santos48 ▴ 30
Is possible to annotated results %0 assigned using featureCounts?
Comment: How to remove repeated sequence region in Interproscan .gff3 with many ORFs? by Juke34 ★ 5.8k
If your file does contains only `ORF` and `nucleic_acid` and they are independant, the way to go is to put them in the ` features_level1.j…
Comment: Beagle: Skip intervals with no common markers by Jack ▴ 10
sorry I forgot to clarify, in the example `beagle` is an alias for `java -Xmx50g -jar beagle.25Nov19.28d.jar`
Comment: Biopython's Esearch for Pubmed does not give the same results as web search by GenoMax 103k
To follow up on this - Entrezdirect seems to be doing an "All Fields" search by default. $ esearch -db pubmed -query "sclerosis" <…
Comment: Local realignment around indels by Pierre Lindenbaum 136k
when publishing it's (sadly?) better to say you used the "GATK best practices" to call your variants...
Comment: MERLIN: skipped due to megabytes problem by 349151519 • 0
Thank you so much for replying. I reduced my pedigree size and it worked. : )
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