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Showing top results for tag:
EPIC
•
reset
0
votes
0
replies
60
views
Copy number Variation frequency plot
CNV
EPIC
450k
methylation
8 days ago by
user911111111
• 0
0
votes
0
replies
282
views
Is there any method to compare t-SNE plot drawn by same samples and different standard?
EPIC
t-sne
Methylation array
Methylation
3 months ago by
kwanghoon
▴ 20
0
votes
0
replies
155
views
Minfi's combineArrays returns intersect
minfi
methylation
450K
EPIC
ChAMP
3 months ago by
MoltenLight
• 0
0
votes
0
replies
165
views
Illumina HumanMethylation - Exclusion Criteria for Poor Quality Samples
methylation
Infinium arrays
EPIC
450K
minfi
3 months ago by
MoltenLight
• 0
2
votes
3
replies
1.3k
views
Appropriate Pipeline for Methylation EPIC array analysis?
epic
methylation arrays
updated 3 months ago by
BiostarGuardianAngel
• 0 • written 12 months ago by
Ankit
▴ 180
0
votes
4
replies
2.1k
views
ChAMP probe.features displays only CHR and MAPINFO, and it entails epic data, whereas probe.features.epic does not exist
champ
annotation
dna methylation
epic
updated 3 months ago by
BiostarGuardianAngel
• 0 • written 4.9 years ago by
Line Heylen
▴ 30
0
votes
0
replies
361
views
Deconvolution of bulk RNA sequencing PBMC: different results for different methods
quantiseq
cibersort
epic
ABIS
Deconvolution
6 months ago by
MatStat
▴ 140
0
votes
0
replies
122
views
How to check if baseline methylation levels influence response to intervention?
DNA methylation
EPIC
6 months ago by
macsuejacques
• 0
0
votes
0
replies
256
views
Methylation data analysis using unsupervised hierarchical clustering
EPIC
Methylation Array
7 months ago by
kwanghoon
▴ 20
0
votes
0
replies
220
views
How do I analyze MGMT methylation status from EPIC array data?
Methylation
MGMT
EPIC
array
Brain Tumor
9 months ago by
kwanghoon
▴ 20
0
votes
1
reply
548
views
EPIC methylation manifest GRch38 query
methylation
coordinates
EPIC
bedgraph
CpG
10 months ago by
prasundutta87
▴ 470
5
votes
8
replies
5.1k
views
10 follow
Compare 450k with EPIC
Methylation
450k
850k
EPIC
written 4.8 years ago by
Tanvir Ahamed
▴ 300
4
votes
7
replies
567
views
Skewed beta-distribution from Methylation EPIC array data
metylation
EPIC
Illumina
ChAMP
updated 14 months ago by
Charles Warden
8.0k • written 14 months ago by
erwin.tomasich
• 0
0
votes
0
replies
1.1k
views
Normalization for combined data from multiple sources: ssNoob + BMIQ/quantile?
DNA methylation
normalization
R
450k
epic
updated 18 months ago by
Biostar
20 • written 3.7 years ago by
victor.2wy
• 0
0
votes
1
reply
1.3k
views
Can EPIC call peaks on files without control?
sicer
epic
ChIP-Seq
peak-calling
updated 2.0 years ago by
endrebak
▴ 870 • written 4.4 years ago by
ariel.balter
▴ 140
0
votes
4
replies
1.6k
views
Current status of EPIC peak caller
epic
ChIP-Seq
peak calling
updated 2.0 years ago by
endrebak
▴ 870 • written 4.5 years ago by
ariel.balter
▴ 140
2
votes
2
replies
597
views
Human Brain Cells (450k/EPIC Array)
Methylation
450k
EPIC
2.0 years ago by
ResearchR
▴ 90
6
votes
4
replies
3.0k
views
EPIC array annotation
methylation
array
epic
updated 2.9 years ago by
andrew.j.skelton73
6.2k • written 2.9 years ago by
bruce.moran
▴ 870
0
votes
1
reply
1.1k
views
How can I find the region coordinates of my methylation EPIC Illumina data?
Methylation
Manifest
RNA-Seq
EPIC
updated 3.0 years ago by
h.mon
32k • written 3.0 years ago by
Pin.Bioinf
▴ 290
2
votes
1
reply
1.0k
views
How to deconvolute whole blood and analyzed cell type separately for EWAS
methylation
cpg
850K
EPIC
updated 3.2 years ago by
Kevin Blighe
72k • written 3.2 years ago by
simplitia
▴ 40
0
votes
1
reply
1.0k
views
Determine "global" methylation from Illumina EPIC data?
methylation
infinium
epic
updated 3.5 years ago by
andrew.j.skelton73
6.2k • written 3.5 years ago by
Ellen O
▴ 20
29
votes
27
replies
4.7k
views
ChAMP error in EPIC data import
methylation
ChAMP
EPIC
idat
R
updated 3.8 years ago by
tianyuan1991hit
▴ 20 • written 3.9 years ago by
mac
▴ 60
3
votes
2
replies
2.2k
views
Illumina methylationEPIC demo data in IDAT format?
illumina
methylation
methylationEPIC
IDAT
EPIC
updated 3.9 years ago by
Santosh Anand
5.3k • written 3.9 years ago by
Ellen O
▴ 20
0
votes
3
replies
1.4k
views
EPIC Error calculating readlength
epic
peak calling
ChIP-Seq
software error
4.5 years ago by
ariel.balter
▴ 140
16
votes
6
replies
1.4k
views
ChIP-Seq: When reducing paired end reads to one coordinate, should I use the midpoint?
ChIP-Seq
epic
SICER
updated 4.7 years ago by
Mads Lerdrup
▴ 450 • written 4.7 years ago by
endrebak
▴ 870
25 results • Page
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Great! Thank you ATpoint
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The two reads are roughly 23GB each, the only other large output file generated in my last attempt was the trimlog file, which was only 1.5…
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