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5 weeks ago by
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Method detecting surface / bounday Carbon-alpha (or sidechains) atoms of PDB 3d coordinates / points
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written 7.7 years ago by
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6 months ago by
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updated 8 months ago by
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written 23 months ago by
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updated 16 months ago by
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written 10.3 years ago by
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18 months ago by
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updated 2.7 years ago by
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written 8.8 years ago by
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Comment: Beagle: Skip intervals with no common markers
by
Jack
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10
sorry I forgot to clarify, in the example `beagle` is an alias for `java -Xmx50g -jar beagle.25Nov19.28d.jar`
Comment: Biopython's Esearch for Pubmed does not give the same results as web search
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To follow up on this - Entrezdirect seems to be doing an "All Fields" search by default.
$ esearch -db pubmed -query "sclerosis"
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when publishing it's (sadly?) better to say you used the "GATK best practices" to call your variants...
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349151519
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Thank you so much for replying. I reduced my pedigree size and it worked. : )
Comment: MERLIN: skipped due to megabytes problem
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349151519
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Thank you so much for replying. I reduced my pedigree size and it worked. : )
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That information is generally shown in tables etc. Number of genes from your list that are present in the pathway.
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This is a not an answer to the above question, please open a new question.
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Is there a way to export just the genes from our dataset? I do not want all the genes from the pathway, rather just the genes that are part…
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Have a read of the trRosetta paper and the section "Structure Determination by Energy Minimization with Predicted Restraints" will give you…
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I was calling the variants with bcftools. Do you suggest me to use GATK4 instead? (I have a targeted sequencing problem with tumor samples)
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I can think of two factors that might cause different results between Biopython and the web search:
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@seidel, thank you very much.
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Hi, what if you have 20 patients and for each patient you have two sources of tissues (Primary and metastatic). I have tried the below but …
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`diff` returns exit code 1 if the files differ and that makes snakemake throw the error you see. Similar behaviour happens if `grep` doesn'…
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