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No love for [Tablet][1]? I'm quite surprised to not see it mentioned here. Of course, IGV is the classic, and Tablet is a bit simpler than …
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I tried to use the SRA toolkit a few months ago, I succesfully installed it and used `prefetch` to get the data, as per their tutorial, but…
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If each group has `._1_1.txt.fa` and the pattern is exactly same as in OP, try this:
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Dear @juanjo75es, thank you for your input. We do agree that NGS data/metadata should be more accessible to public, in part also due to ini…
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gtechbio
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Dear @grant.hovhannisyan, thank you for the advice. In fact we are already in touch with two local genomics facilities, though as you have …
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Try raising your p-value to make sure that they aren't all just being filtered out by that threshold (which seems pretty low).
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It looks like the following:
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anikcropscience
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Yes, I am using the following loop first in R to process all the files. This is the code that I am running first:
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agreed, especially if no private information (names, clinical status, etc) is needed, this information should be freely accessible.
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The GenTable() function has a parameter called *numChar* that controls this: "the GO term definition will be truncated such that only the f…
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What does your `system()` command look like now, after having added `--anysymbol`? I am guessing you added `--anysymbol` right before that …
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