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multi-omics
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366
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Job:
Bioinformatician position in multi-omics modeling of renal cancer biology for precision medicine (CEA, France)
multi-omics
cancer biology
precision medicine
Job
4 weeks ago by
chris_battail
• 0
0
votes
0
replies
201
views
Job:
Microbial cell factory engineer at DTU Biosustain
genome
multi-OMICS
big data
Job
10 weeks ago by
info
▴ 60
0
votes
1
reply
354
views
Where can I find Time Series Multi-Omics human cancer datasets
multi-omics
dataset
time series
cancer
12 months ago by
donnieDarko
• 0
1
vote
0
replies
751
views
Job:
Research Scientist Bioinformatics at Evotec (Goettingen, Germany)
RNA-Seq
Proteomics
multi-omics
data analysis
Job
18 months ago by
Manuel Landesfeind
★ 1.3k
0
votes
0
replies
791
views
Job:
Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer
multi-omics
data integration
Job
2.0 years ago by
msecrier
• 0
3
votes
1
reply
434
views
News:
Results are now available for the precisionFDA NCI-CPTAC Multi-omics Enabled Sample Mislabeling Correction Challenge!
multi-omics
NCI
precisionFDA
challenge
algorithm
News
2.2 years ago by
sarah01122009
▴ 60
3
votes
2
replies
486
views
News:
BETA Testing Opportunity for new RNA-seq data analysis tool
beta
rnaseq
omics
multi-omics
ngs
News
updated 2.2 years ago by
WouterDeCoster
45k • written 2.2 years ago by
polina99
• 0
0
votes
0
replies
898
views
Job:
Research Assistant/Associate (Computational Immunobiology) - University of Cambridge
genetics
genomics
immunology
multi-omics
Job
2.4 years ago by
mbrozynska
▴ 50
2
votes
0
replies
435
views
News:
The deadline for Subchallenge 1 of the precisionFDA NCI-CPTAC Mislabeling Challenge is 11/4!
challenge
multi-omics
News
2.4 years ago by
sprezek
▴ 40
1
vote
0
replies
750
views
Job:
Research Assistant/Associate (Structural Genomics) (Fixed Term) - University of Cambridge
genomics
genetics
statistics
multi-omics
Job
2.5 years ago by
mbrozynska
▴ 50
1
vote
3
replies
2.1k
views
Are there any multi-omics public data sets available online?
multi-omics
data set
Forum
updated 6.6 years ago by
Neilfws
49k • written 6.6 years ago by
scottwilliamrobinson
▴ 130
11 results • Page
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Recent Votes
Comment: RNA-SEQ count data as input for Machine Learning
Answer: RNA-SEQ count data as input for Machine Learning
A: Could you explain the difference between STAR, KALLISTO, SALMON etc. to experime
Answer: What Do You Waste Your Time On
C: What Do You Waste Your Time On
What Do You Waste Your Time On
Answer: What Do You Waste Your Time On
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Recent Replies
Answer: How to visualize Multiple Sequence Alignment with python ?
by
Mensur Dlakic
★ 10k
Can't think of a particularly good alignment viewer in python. If you are more interested in result rather than doing it in python, ther…
Comment: Using outgroup in gene family dendograms
by
Mensur Dlakic
★ 10k
> Wouldn't a gene that isn't an ABC superfamily member from some distant species suffice as an outgroup candidate here? Most definitely no…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database
by
Istvan Albert
87k
with that definition I would suspect that all of your sequences are "dependent", I would expect every functional DNA/RNA region to capture …
Comment: Taxonomy assignment of viral RNA
by
biobiu
▴ 120
Thanks! As for the blast option- (1) so do you suggest to just blast the contig against a db of viral RNAs? and (2) is there a comprehensiv…
Comment: Finding how many times a nucleotide appear in the same position
by
cpad0112
15k
#!/usr/bin/env python3 sequences = ["GAGGTAAACTCTG", "TCCGTAAGTTTTC", "CAGGTTGGAACTC", "ACAGTCAGTTCAC", "TAGGTCATTACAG", "TAGG…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database
by
Anand Rao
▴ 350
Thanks for your reply. Yes, I think I could have explained my problem much better, but rather than change my original post, I will add some…
Answer: Finding how many times a nucleotide appear in the same position
by
Dunois
▴ 610
Here's a little `python` function you can work off of: def count_quer_at_pos_in_seq(seqs, quer = "A"): #Initialize a list…
Comment: Using outgroup in gene family dendograms
by
Rogerio Ribeiro
▴ 50
Thank for the fast reponse. The ABC family is not the best example for this question indeed. The objective of my work is to find genes resp…
Answer: Taxonomy assignment of viral RNA
by
Zhilong Jia
★ 1.7k
1. Blast directly 2. [IDSeq][1], can get viral contigs and their annotation directly. [IDSeq : An open-source cloud-based pipeline and…
Comment: Finding how many times a nucleotide appear in the same position
by
hugo.avila
▴ 180
Hi, It is not a norm but it is a good practice to post an attempted resolution first and then other members try to correct it or suggest an…
Comment: What Do You Waste Your Time On
by
ponganta
▴ 160
Aye to the rushed analyses and the last-minute documentation. Horrible, but somehow it happens all the time.
Answer: What Do You Waste Your Time On
by
ponganta
▴ 160
Reinventing the wheel. Like, all the time. Why use clusterProfiler with an up-to-date GO-annotation, when you can just write your own clien…
Comment: RNAseq data analysis of pooled data
by
ponganta
▴ 160
By "pooled" data, do you mean data from tissue-specific bulk-RNAseq? Or did you pool single cell (SC) RNAseq-libraries?
Comment: RNAseq data analysis of pooled data
by
Dunois
▴ 610
What exactly do you mean by "pooled" data?
Answer: RNAseq data analysis of pooled data
by
grant.hovhannisyan
★ 2.1k
I made a tutorial last year for University students on this topic https://www.loom.com/share/a55c1dedb8e64e7cac47f6595b751de7. Let me know …
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