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21
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11
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Forum: Rust bioinformatics projects ideas
projects scRNA-seq RNA-seq Rust
updated 10 months ago by 22k • written 19 months ago by ▴ 160
1
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1
reply
487
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Which type of variant caller should I use in a WES normal cell line sample?
variant-caller WES
updated 16 months ago by 85k • written 16 months ago by ▴ 160
0
votes
0
replies
643
views
Picard's CollectGcBiasMetrics gc-bias plot- help with interpretation
picard gc-bias wes
16 months ago by bompipi95 ▴ 160
1
vote
3
replies
1.6k
views
Off-target % for whole-exome sequencing panel
WES
updated 17 months ago by ★ 1.9k • written 17 months ago by ▴ 160
0
votes
1
reply
690
views
WES variant calling with DNBSEQ-T7 - technical quality assessment
WES DNA-seq GATK variant-calling mutect2
updated 17 months ago by 6.8k • written 17 months ago by ▴ 160
0
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1
reply
8.1k
views
Comment: Comment: 10x 3' library creates R1 and R2 fastq files with the same read length
19 months ago by bompipi95 ▴ 160
0
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0
replies
684
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Comment: Comment: Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
19 months ago by bompipi95 ▴ 160
0
votes
2
replies
684
views
Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
snRNAseq single-cell scRNAseq
19 months ago by bompipi95 ▴ 160
0
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0
replies
1.1k
views
Comment: Comment: Check my understanding - difference between number of reads sequenced and Seurat
19 months ago by bompipi95 ▴ 160
1
vote
2
replies
1.1k
views
Check my understanding - difference between number of reads sequenced and Seurat nCount_RNA
scRNAseq
19 months ago by bompipi95 ▴ 160
0
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0
replies
947
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Comment: Comment: issue with merging single cell data files
19 months ago by bompipi95 ▴ 160
0
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0
replies
3.2k
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Comment: Comment: Rust bioinformatics projects ideas
19 months ago by bompipi95 ▴ 160
0
votes
0
replies
3.2k
views
Comment: Comment: Rust bioinformatics projects ideas
19 months ago by bompipi95 ▴ 160
0
votes
0
replies
3.2k
views
Comment: Comment: Rust bioinformatics projects ideas
19 months ago by bompipi95 ▴ 160
0
votes
0
replies
3.2k
views
Comment: Comment: Rust bioinformatics projects ideas
19 months ago by bompipi95 ▴ 160
0
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0
replies
1.7k
views
Comment: Comment: 1 is not found in chromosome sizes file
19 months ago by bompipi95 ▴ 160
2
votes
0
replies
992
views
Answer: Answer: To batch correct or analyse separately?
20 months ago by bompipi95 ▴ 160
6
votes
3
replies
992
views
To batch correct or analyse separately?
scRNA-seq batch-effect
updated 3 months ago by 44k • written 20 months ago by ▴ 160
4
votes
6
replies
1.2k
views
Aligning reads from mouse samples that express 1 human gene
realignment
updated 8 weeks ago by 14k • written 23 months ago by ▴ 160
0
votes
0
replies
1.2k
views
Comment: Comment: Aligning reads from mouse samples that express 1 human gene
23 months ago by bompipi95 ▴ 160
3
votes
1
reply
881
views
t2t human reference genome for RNA-seq
t2t hs1 RNA-seq
updated 19 months ago by ▴ 740 • written 23 months ago by ▴ 160
1
vote
2
replies
7.1k
views
Comment: Comment: How can I learn how to create a bioinformatics pipeline?
23 months ago by bompipi95 ▴ 160
0
votes
0
replies
600
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Answer: Answer: Close correlation between differentially-expressed genes
23 months ago by bompipi95 ▴ 160
6
votes
2
replies
1.1k
views
Identifying tumor vs normal cells in scRNAseq samples
seurat CNV scRNA-seq cancer
updated 2.1 years ago by 4.0k • written 2.1 years ago by ▴ 160
2
votes
2
replies
1.3k
views
Help with kallisto-bustools: how to interpret the inspect.json output file
scRNAseq bustools kallisto
updated 16 months ago by 44k • written 2.4 years ago by ▴ 160
1
vote
1
reply
1.3k
views
Answer: Answer: Help with kallisto-bustools: how to interpret the inspect.json output file
2.4 years ago by bompipi95 ▴ 160
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