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Answer:
Answer: Retrieve the FASTA transcript sequences of a list of NCBI genes
updated 2.6 years ago by
Ram
44k • written 9.6 years ago by
st.ph.n
★ 2.7k
2
votes
0
replies
3.5k
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Answer:
Answer: How to filter a fasta file?
updated 19 months ago by
Ram
44k • written 8.8 years ago by
st.ph.n
★ 2.7k
0
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0
replies
2.0k
views
Answer:
A: Problem with extract aligment from a blast result to a fasta file....
updated 5.1 years ago by
Ram
44k • written 10.2 years ago by
st.ph.n
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2
votes
1
reply
2.7k
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Answer:
A: Using Trinity with case/control data
updated 5.1 years ago by
Ram
44k • written 10.2 years ago by
st.ph.n
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1
vote
0
replies
9.5k
views
Answer:
A: Average insert size for paired end Illumina RNA-seq
updated 5.1 years ago by
Ram
44k • written 10.2 years ago by
st.ph.n
★ 2.7k
1
vote
1
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3.0k
views
Answer:
A: Writing a bash loop to convert sams to bams
5.6 years ago by
st.ph.n
★ 2.7k
1
vote
1
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2.2k
views
Answer:
A: Split comma seperated list of GO terms into multiple rows and maintain gene iden
5.6 years ago by
st.ph.n
★ 2.7k
4
votes
1
reply
5.0k
views
Answer:
A: Batch rename *fastq.gz files using regular expression
6.4 years ago by
st.ph.n
★ 2.7k
2
votes
0
replies
2.7k
views
Answer:
A: headers from multifasta files
6.5 years ago by
st.ph.n
★ 2.7k
1
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2
replies
2.3k
views
Answer:
A: help in converting a table
6.6 years ago by
st.ph.n
★ 2.7k
0
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1
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1.9k
views
Answer:
A: how to separate/split numbers
6.7 years ago by
st.ph.n
★ 2.7k
2
votes
2
replies
4.5k
views
Answer:
A: Any ideas on converting IUPAC ambiguity codes in a fasta file
6.7 years ago by
st.ph.n
★ 2.7k
4
votes
0
replies
3.4k
views
Answer:
A: Binning fasta sequences by size?
6.8 years ago by
st.ph.n
★ 2.7k
1
vote
0
replies
1.6k
views
Answer:
A: Python: grep the strings whiitn "[ ]"
6.8 years ago by
st.ph.n
★ 2.7k
2
votes
0
replies
3.6k
views
Answer:
A: parsing fastq files in python
6.9 years ago by
st.ph.n
★ 2.7k
0
votes
0
replies
16k
views
Answer:
A: How to remove Bad Nucleotides represented by "N" from FASTA file by using UNIX?
6.9 years ago by
st.ph.n
★ 2.7k
6
votes
0
replies
13k
views
Answer:
A: Find consensus sequence of several DNA sequences
7.0 years ago by
st.ph.n
★ 2.7k
1
vote
0
replies
1.0k
views
Answer:
A: Write List of subject ID numbers to a new text file(s)
7.0 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
4.9k
views
Answer:
A: Extract Sequence From Fasta and remove some characters before printing
7.0 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
2.6k
views
Answer:
A: Set up a blast remote server
7.0 years ago by
st.ph.n
★ 2.7k
1
vote
1
reply
2.2k
views
Answer:
A: How to retrieve rows from OTU table
7.0 years ago by
st.ph.n
★ 2.7k
1
vote
0
replies
1.6k
views
Answer:
A: Extract the targeted txt using python
7.0 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
4.6k
views
Answer:
A: VCF files examples
7.0 years ago by
st.ph.n
★ 2.7k
3
votes
0
replies
2.3k
views
Answer:
A: Error of Trinity Abundance estimation using RSEM
7.1 years ago by
st.ph.n
★ 2.7k
1
vote
0
replies
2.2k
views
Answer:
A: RunningTBLASTN many times with python
7.1 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
1.6k
views
Answer:
A: Iterating over different variables in bash script
7.1 years ago by
st.ph.n
★ 2.7k
6
votes
1
reply
4.1k
views
Answer:
A: perl script for concatenating (multiple fasta sequences in a single file), creat
7.1 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
1.6k
views
Answer:
A: conditional replacing rows with 9
7.1 years ago by
st.ph.n
★ 2.7k
2
votes
0
replies
2.8k
views
Answer:
A: How to split columns into rows based on gene ids in R?
7.2 years ago by
st.ph.n
★ 2.7k
1
vote
1
reply
3.1k
views
Answer:
A: Extract pairs of sequences from a fasta file based on a CSV list of headers
7.2 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
7.8k
views
Answer:
C: Pulling out gene names from a FASTA file with a list of IDs
7.2 years ago by
st.ph.n
★ 2.7k
3
votes
0
replies
2.0k
views
Answer:
C: Combining several fasta files and gff files
7.2 years ago by
st.ph.n
★ 2.7k
3
votes
1
reply
18k
views
Answer:
A: Convert sequence file to fasta format using python
7.2 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
3.3k
views
Answer:
C: Blastn error, database creation problem, BLAST
7.2 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
3.1k
views
Answer:
C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.2 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
2.9k
views
Answer:
C: How do I retrieve a specific region of a chromosome from a local blast database
7.2 years ago by
st.ph.n
★ 2.7k
2
votes
1
reply
7.2k
views
Answer:
A: Rename headers of multiple fasta files inside loop
7.2 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
2.4k
views
Answer:
A: Rename an existing BLAST database
7.3 years ago by
st.ph.n
★ 2.7k
3
votes
1
reply
6.9k
views
Answer:
A: change specific bases in a fasta file
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
9.0k
views
Answer:
A: How to display mismatched sequences from alignment when using Biopython
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
0
replies
8.7k
views
Answer:
A: Compare two columns in several different files with Perl or Python
7.3 years ago by
st.ph.n
★ 2.7k
1
vote
1
reply
4.0k
views
Answer:
A: Read In Multiple Text Files to Calculate a Threshold Python
7.3 years ago by
st.ph.n
★ 2.7k
1
vote
0
replies
2.0k
views
Answer:
A: how to write a script to grep the lowest e-value for each gene?
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
0
replies
1.5k
views
Answer:
A: filter DNA sequences of defined length for certain bases at exact positions
7.3 years ago by
st.ph.n
★ 2.7k
2
votes
0
replies
1.6k
views
Answer:
A: how to write scripts to split GO terms as one per line
7.3 years ago by
st.ph.n
★ 2.7k
4
votes
1
reply
4.7k
views
Answer:
A: Comparison between multiple fasta files in terms of presence or absence of certa
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
6.1k
views
Answer:
A: Extract nucleotides from fasta file by a single position
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
1
reply
3.6k
views
Answer:
A: Extact specific sequence from a fasta file into multiple files using ID and EC f
7.3 years ago by
st.ph.n
★ 2.7k
1
vote
3
replies
6.4k
views
Answer:
A: Remove the last few bases from fasta sequences
7.3 years ago by
st.ph.n
★ 2.7k
0
votes
0
replies
2.4k
views
Answer:
A: How to extract equal number of R1 and R2 read from raw Illumina data
7.4 years ago by
st.ph.n
★ 2.7k
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