User: zhxq09

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zhxq09140
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China
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5 years ago
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5 years, 3 months ago
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Posts by zhxq09

<prev • 13 results • page 1 of 2 • next >
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... I am trying to using starBase in order to look for miR-lncRNA interactions. Is the lncRNAs list that are available on site is complete? ...
written 5.0 years ago by zhxq09140
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... what is mean for bioComplex and clipReadNum in starBase? ...
written 5.1 years ago by zhxq09140
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... How can i find the lncRNAs with chromosome locations but not gene names in starBase? ...
written 5.2 years ago by zhxq09140
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... in starBase download page, what a numerical value (displayed in the score column of bed files) means? Is it CLIP-Seq peak height? It can be further used to filter Protein-RNA interactions??? ...
written 5.2 years ago by zhxq09140
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... in starBase, what methods were used to identify CLIP-Seq peaks? ...
written 5.2 years ago by zhxq09140
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Answer: A: Pan-Cancer Analysis And Networks Of Lncrnas, Mirnas, Cernas And Rna-Binding Prot
... How can I download Pan-Cancer data (14 cancer types) of miRNA-lncRNA, protein-lncRNA, competing endogenous RNA (ceRNA) pairs from your website. ...
written 5.3 years ago by zhxq09140
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Comment: C: How To Get Mirna-Mrna Expression In Same Sample From Tcga ?
... you can find that starBase really provides expression values of miRNAs and mRNAs from same person. Tutorial of starBase shows the expression values of miRNAs and mRNAs from same person. You can get their tutorial with following website: http://starbase.sysu.edu.cn/downloads/starBase_Pan-Cancer_Platf ...
written 5.3 years ago by zhxq09140
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Answer: A: How To Get Mirna-Mrna Expression In Same Sample From Tcga ?
... you can find that starBase really provides expression values of miRNAs and mRNAs from same person. For example: hsa-miR-141-3p:ZEB1 interactions (http://starbase.sysu.edu.cn/pcMirTargetInfo.php?database=hg19&name=hsa-miR-141-3p&targetGene=ZEB1&autoId=179263#expTabs) You move mouse on t ...
written 5.3 years ago by zhxq09140
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Answer: A: How To Get Mirna-Mrna Expression In Same Sample From Tcga ?
... starBase has constructed Pan-Cancer miRNA-mRNA interaction maps from TCGA matched miRNA-Seq and RNA-Seq data. starBase provided pearsion correlations between miRNA and target expression profiles. For example: hsa-miR-21-5p and its target gene PDCD4 and mir-200 and its target gene ZEB2 In additio ...
written 5.3 years ago by zhxq09140
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Answer: A: Where To Find Mirna Related Microarray Data For Leukemia Patients?
... You can use starBase Pan-Cancer Analysis Platform . starBase Pan-Cancer Analysis Platform is designed for deciphering Pan-Cancer Networks of lncRNAs, miRNAs, ceRNAs and RNA-binding proteins (RBPs) by mining clinical and expression profiles of 14 cancer types (>6000 samples) from The Cancer Genome ...
written 5.3 years ago by zhxq09140

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