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Posts by zhxq09
... In miRNA-mRNA query webpage, if you do not input/select anything, you can browse and download all miRNA-mRNA interactions. You only click "export" at the upper left corner of the table and download all results. ...
... You can use starBase Pan-Cancer miRNA that is designed for deciphering Pan-Cancer Networks of miRNAs, lncRNAs, ceRNAs and RNA-binding proteins (RBPs) by mining clinical and expression profiles of 14 cancer types (>6000 samples) from The Cancer Genome Atlas (TCGA) Data Portal (all data available ...
... Different miRNA target prediction programs produce different results and have high false positive rates. You can use CLIP-Seq datasets to further filter the predicted miRNA targets. starBase collect and curate 111 CLIP-Seq (PAR-CLIP, CLASH, HITS-CLIP, ICLIP) datasets. You can download them at downl ...
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