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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
8 days ago by bioinfo ▴ 150
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258
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Comment: Comment: How to row normalize a matrixplot?
9 days ago by bioinfo ▴ 150
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286
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
23 days ago by bioinfo ▴ 150
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286
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
23 days ago by bioinfo ▴ 150
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481
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Comment: Comment: How does kallisto handle multi mapped reads?
8 weeks ago by bioinfo ▴ 150
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481
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Comment: Comment: How does kallisto handle multi mapped reads?
9 weeks ago by bioinfo ▴ 150
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957
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
5 months ago by bioinfo ▴ 150
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957
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
5 months ago by bioinfo ▴ 150
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957
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Comment: Comment: How much adapters is it ok to keep in my samples after RNA seq?
5 months ago by bioinfo ▴ 150
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664
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Comment: Comment: Why am I getting different results with kallisto?
5 months ago by bioinfo ▴ 150
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664
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Comment: Comment: Why am I getting different results with kallisto?
5 months ago by bioinfo ▴ 150
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664
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Comment: Comment: Why am I getting different results with kallisto?
5 months ago by bioinfo ▴ 150
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466
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Comment: Comment: Are truseq adapter sequences picked up by FASTQC?
5 months ago by bioinfo ▴ 150
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670
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Comment: Comment: How to assign gene names after kallisto when I add GFP?
6 months ago by bioinfo ▴ 150
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670
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Comment: Comment: How to assign gene names after kallisto when I add GFP?
6 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bioinfo ▴ 150
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1.8k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bioinfo ▴ 150
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647
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Comment: Comment: How to calculate GC content of reads that mapped to a specific gene?
7 months ago by bioinfo ▴ 150
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887
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
7 months ago by bioinfo ▴ 150
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887
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
7 months ago by bioinfo ▴ 150
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887
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
7 months ago by bioinfo ▴ 150
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1
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887
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Comment: Comment: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
7 months ago by bioinfo ▴ 150
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929
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Comment: Comment: Questions about per base sequence quality and GC content.
8 months ago by bioinfo ▴ 150
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929
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Comment: Comment: Questions about per base sequence quality and GC content.
8 months ago by bioinfo ▴ 150
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952
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Comment: Comment: How to choose threshold for scrublet?
8 months ago by bioinfo ▴ 150
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929
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Comment: Comment: Questions about per base sequence quality and GC content.
8 months ago by bioinfo ▴ 150
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714
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Comment: Comment: How to assign gene names to ensembl IDs if species not in Biomart
8 months ago by bioinfo ▴ 150
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2
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1.4k
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Comment: Comment: Why do I need to sort and index gtf file for IGV?
9 months ago by bioinfo ▴ 150
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727
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Comment: Comment: Where can I find the --chromosomes file for kallisto?
9 months ago by bioinfo ▴ 150
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775
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Comment: Comment: Does adding reads cause batch effects?
10 months ago by bioinfo ▴ 150
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775
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Comment: Comment: Does adding reads cause batch effects?
10 months ago by bioinfo ▴ 150
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1.3k
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Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
12 months ago by bioinfo ▴ 150
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1
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1.3k
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Comment: Comment: How to demultiplex data with totalseq B antibodies using hashsolo?
12 months ago by bioinfo ▴ 150
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621
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Comment: Comment: Do I need to specify the introns on the gtf file for cellranger?
12 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: How to add gene entry to gtf file?
14 months ago by bioinfo ▴ 150
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1.4k
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Comment: Comment: How to add gene entry to gtf file?
14 months ago by bioinfo ▴ 150
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2
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1.4k
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Comment: Comment: How to add gene entry to gtf file?
14 months ago by bioinfo ▴ 150
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1.2k
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Comment: Comment: How to interpret dotplot from enrichment analysis with gseapy?
14 months ago by bioinfo ▴ 150
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1.2k
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Comment: Comment: How to interpret dotplot from enrichment analysis with gseapy?
14 months ago by bioinfo ▴ 150
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4.7k
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Comment: Comment: Encountering error when loading scanpy?
14 months ago by bioinfo ▴ 150
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2
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813
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Comment: Comment: How to remove a gene before making a cellranger reference?
14 months ago by bioinfo ▴ 150
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489
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Comment: Comment: Do I need to merge files after downloading them from SRA?
14 months ago by bioinfo ▴ 150
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2.0k
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Comment: Comment: How to make a UMAP for single cell data and color cells by average expression of
14 months ago by bioinfo ▴ 150
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1.1k
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Comment: Comment: Problem with tximport and plasmodium falciparum
14 months ago by bioinfo ▴ 150
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1.1k
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Comment: Comment: Problem with tximport and plasmodium falciparum
14 months ago by bioinfo ▴ 150
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1.0k
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Comment: Comment: How to perform scRNA seq analysis?
15 months ago by bioinfo ▴ 150
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1.3k
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Comment: Comment: Issues with chromosome file in kallisto
16 months ago by bioinfo ▴ 150
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1
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1.3k
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Comment: Comment: Issues with chromosome file in kallisto
16 months ago by bioinfo ▴ 150
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