Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
607
views
Comment: Comment: Can I demultiplex run based on i5 sequence?
6 months ago by bioinfo ▴ 80
0
votes
10
replies
607
views
Can I demultiplex run based on i5 sequence?
demultiplexing bcl2fastq
updated 6 months ago by 130k • written 6 months ago by ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: How to choose parameters for kallisto single end mode?
7 months ago by bioinfo ▴ 80
3
votes
13
replies
1.7k
views
How to choose parameters for kallisto single end mode?
kallisto RNA-seq
updated 25 days ago by 98k • written 7 months ago by ▴ 80
0
votes
0
replies
1.7k
views
Comment: Comment: How to choose parameters for kallisto single end mode?
7 months ago by bioinfo ▴ 80
7
votes
3
replies
974
views
Should I merge my technical replicates for bulk RNA seq?
RNA-seq DESeq2
updated 3 months ago by 39k • written 7 months ago by ▴ 80
4
votes
4
replies
551
views
Can I perform DE analysis with Seurat if I only have one sample per condition?
single RNA Seq cell seurat
updated 7 months ago by 2.6k • written 7 months ago by ▴ 80
0
votes
0
replies
200
views
How do I get estimated gene counts for a reference that contains GFP using Kallisto?
gene ensembl tximport kallisto
8 months ago by bioinfo ▴ 80
0
votes
0
replies
749
views
Comment: Comment: How can I confirm that I installed bcl2fastq correctly?
9 months ago by bioinfo ▴ 80
0
votes
0
replies
749
views
Comment: Comment: How can I confirm that I installed bcl2fastq correctly?
9 months ago by bioinfo ▴ 80
4
votes
4
replies
749
views
How can I confirm that I installed bcl2fastq correctly?
bcl2fastq linux ubuntu
9 months ago by bioinfo ▴ 80
3
votes
2
replies
456
views
Why do I get a positive gene expression with qPCR for one my genes but in with when doing bulk RNA seq I get a count of 0?
gene qpcr kallisto seq expression rna
updated 10 months ago by ★ 4.2k • written 10 months ago by ▴ 80
1
vote
3
replies
509
views
How to filter .fa file by gene_biotype
rna-seq kallisto
updated 11 months ago by 39k • written 12 months ago by ▴ 80
0
votes
1
reply
742
views
Comment: Comment: How to create kallisto index that does not include ribosomal genes
12 months ago by bioinfo ▴ 80
0
votes
1
reply
742
views
Comment: Comment: How to create kallisto index that does not include ribosomal genes
12 months ago by bioinfo ▴ 80
0
votes
7
replies
742
views
6 follow
How to create kallisto index that does not include ribosomal genes
enseml kallisto RNA-seq
updated 5 months ago by 39k • written 12 months ago by ▴ 80
0
votes
0
replies
264
views
Replicates in sc-RNA seq have different amount of cells-Can I still use them for the analysis?
Cell seurat Single
updated 12 months ago by 72k • written 12 months ago by ▴ 80
0
votes
2
replies
697
views
Comment: Comment: Can I use the transcripts_to_genes.txt file from kallisto for bulk RNA seq data?
13 months ago by bioinfo ▴ 80
2
votes
4
replies
697
views
Can I use the transcripts_to_genes.txt file from kallisto for bulk RNA seq data?
kallisto
updated 13 months ago by 39k • written 13 months ago by ▴ 80
0
votes
1
reply
686
views
Comment: Comment: Ensembl version for mapping and annotating genes
13 months ago by bioinfo ▴ 80
2
votes
3
replies
686
views
Ensembl version for mapping and annotating genes
rna-seq kallisto
updated 11 months ago by 39k • written 13 months ago by ▴ 80
6
votes
2
replies
404
views
Ensembl version
ensembl kallisto
updated 5 months ago by 39k • written 13 months ago by ▴ 80
2
votes
2
replies
1.6k
views
Cellranger command for RNA velocity
cellranger Cell velocity RNA Single
updated 16 months ago by 8.7k • written 16 months ago by ▴ 80
4
votes
2
replies
702
views
Estimated gene counts with tximport
RNA-seq ensembl tximport kallisto
updated 11 months ago by 39k • written 17 months ago by ▴ 80
3
votes
3
replies
1.1k
views
Will Kallisto show a decrease in the TPM value if I have knocked out 2 of the 8 exons from a gene?
RNA-seq
updated 11 months ago by 39k • written 18 months ago by ▴ 80
0
votes
0
replies
922
views
Comment: Comment: How to demultiplex a single indexed library on a dual indexed flow cell?
18 months ago by bioinfo ▴ 80
2
votes
2
replies
922
views
How to demultiplex a single indexed library on a dual indexed flow cell?
Cell Single
updated 18 months ago by 130k • written 18 months ago by ▴ 80
77 results • Page 2 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6