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5
votes
3
replies
7.9k
views
pybedtools.BedTool.intersect not working, install problem
pybedtools
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 220
1
vote
0
replies
2.4k
views
Comment: C: Select patients for cancer classifier
updated 4.3 years ago by 43k • written 9.9 years ago by ▴ 220
0
votes
1
reply
4.1k
views
Comment: C: Cancer subtypes classifier integrate microarray and rnaseq data
updated 4.3 years ago by 43k • written 9.9 years ago by ▴ 220
0
votes
1
reply
3.2k
views
Comment: Comment: Variance decomposition analysis (solved)
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
6
votes
6
replies
2.5k
views
Efficient way to add annotation to a list of genome positions with python
genome python
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
6
votes
9
replies
9.0k
views
6 follow
Allele frequency of vcf file
SNP
updated 2.2 years ago by ★ 3.5k • written 9.8 years ago by ▴ 220
4
votes
8
replies
9.1k
views
Picard CollectRnaSeqMetrics error
RNA-Seq
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
1
reply
3.1k
views
Comment: Comment: Bioinformatics Career plans and developments
updated 22 months ago by 43k • written 9.1 years ago by ▴ 220
5
votes
3
replies
3.1k
views
Forum: Bioinformatics Career plans and developments
career
updated 22 months ago by 43k • written 9.1 years ago by ▴ 220
0
votes
0
replies
3.7k
views
Comment: C: Replace me: bioinformatician/post-doc at the DZNE (Bonn, Germany)
9.1 years ago by juncheng ▴ 220
1
vote
1
reply
5.1k
views
Count splice junction reads from SAM/BAM files
splice-junction RNA-Seq
updated 23 months ago by 43k • written 9.1 years ago by ▴ 220
0
votes
0
replies
3.0k
views
Answer: A: CLIP-seq data process, start from sra file
9.3 years ago by juncheng ▴ 220
1
vote
3
replies
2.8k
views
Do I need to sort the .bam file for SNP calling by samtools?
SNP
updated 9.3 years ago by 20 • written 9.8 years ago by ▴ 220
4
votes
14
replies
3.2k
views
Variance decomposition analysis (solved)
RNA-Seq R hypothesis-test
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
0
votes
1
reply
3.2k
views
Comment: Comment: Variance decomposition analysis (solved)
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
0
votes
1
reply
3.2k
views
Comment: C: Variance decomposition time series hypothesis testing
9.5 years ago by juncheng ▴ 220
0
votes
0
replies
2.6k
views
Comment: Comment: Ensembl 77 is out
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
0
votes
0
replies
3.2k
views
Comment: C: Variance decomposition time series hypothesis testing
9.5 years ago by juncheng ▴ 220
0
votes
1
reply
3.2k
views
Comment: Comment: Variance decomposition analysis (solved)
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
0
votes
2
replies
3.2k
views
Comment: C: Variance decomposition time series hypothesis testing
9.5 years ago by juncheng ▴ 220
0
votes
1
reply
3.2k
views
Comment: Comment: Variance decomposition analysis (solved)
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 220
2
votes
6
replies
2.2k
views
what does CIGAR '22M2007N79M-61p82M19S' means?
ChIP-Seq
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 220
0
votes
1
reply
2.2k
views
Answer: Answer: what does CIGAR '22M2007N79M-61p82M19S' means?
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 220
0
votes
0
replies
2.2k
views
Comment: Comment: what does CIGAR '22M2007N79M-61p82M19S' means?
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 220
0
votes
2
replies
2.9k
views
Comment: C: Differential expressed gene analysis ---- to normalize the count data and fit in
9.6 years ago by juncheng ▴ 220
2
votes
5
replies
2.9k
views
Differential expressed gene analysis ---- to normalize the count data and fit into a model
R RNA-Seq
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 220
9
votes
7
replies
5.5k
views
fisher test with multiple samples
statistics
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 220
0
votes
0
replies
2.5k
views
Comment: C: Efficient way to add annotation to a list of genome positions with python
9.7 years ago by juncheng ▴ 220
0
votes
0
replies
2.5k
views
Comment: C: Efficient way to add annotation to a list of genome positions with python
9.7 years ago by juncheng ▴ 220
0
votes
0
replies
6.4k
views
Comment: Comment: Get MW of a protein given a uniprot ID in R
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
6
votes
9
replies
13k
views
awk select duplicated lines
awk
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
0
replies
13k
views
Answer: Answer: awk select duplicated lines
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
1
vote
0
replies
13k
views
Comment: Comment: awk select duplicated lines
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
0
replies
13k
views
Comment: Comment: awk select duplicated lines
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
0
replies
13k
views
Comment: C: awk select duplicated lines
9.7 years ago by juncheng ▴ 220
0
votes
0
replies
13k
views
Comment: C: awk select duplicated lines
9.7 years ago by juncheng ▴ 220
0
votes
1
reply
9.1k
views
Comment: C: Picard CollectRnaSeqMetrics error
9.7 years ago by juncheng ▴ 220
0
votes
0
replies
9.1k
views
Comment: C: Picard CollectRnaSeqMetrics error
9.7 years ago by juncheng ▴ 220
0
votes
2
replies
5.5k
views
Comment: Comment: fisher test with multiple samples
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
1
reply
5.5k
views
Comment: Comment: fisher test with multiple samples
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 220
0
votes
0
replies
5.3k
views
Comment: C: Reference sequence and gtf annotation.
9.8 years ago by juncheng ▴ 220
0
votes
1
reply
5.3k
views
Comment: C: Reference sequence and gtf annotation.
9.8 years ago by juncheng ▴ 220
1
vote
5
replies
5.3k
views
Reference sequence and gtf annotation.
RNA-Seq
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 220
0
votes
0
replies
5.3k
views
Answer: A: Reference sequence and gtf annotation.
9.8 years ago by juncheng ▴ 220
0
votes
0
replies
11k
views
Comment: C: Map gene name to gene ID
9.8 years ago by juncheng ▴ 220
0
votes
0
replies
11k
views
Answer: Answer: Map gene name to gene ID
updated 2.2 years ago by 43k • written 9.8 years ago by ▴ 220
5
votes
4
replies
3.8k
views
while read loop shell command
bash
updated 9.8 years ago by ★ 2.7k • written 9.8 years ago by ▴ 220
0
votes
0
replies
3.8k
views
Comment: C: while read loop shell command
9.8 years ago by juncheng ▴ 220
0
votes
0
replies
3.8k
views
Comment: C: while read loop shell command
9.8 years ago by juncheng ▴ 220
0
votes
0
replies
4.4k
views
Comment: C: How to calculate allele specific expression from RNAseq data
9.8 years ago by juncheng ▴ 220
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