User: Bdv

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Bdv290
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290
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New User
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Last seen:
7 years, 7 months ago
Joined:
8 years, 5 months ago
Email:
1***@biostars.org

Posts by Bdv

<prev • 25 results • page 1 of 3 • next >
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Comment: C: Mapping Transcriptome Reads To Est Database
... It is the same species.we are talking about a plant. What is the difference between ESTs and transcriptome sequencing? ...
written 7.8 years ago by Bdv290
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Mapping Transcriptome Reads To Est Database
... hi I wnated to ask whether it makes sense to map transcriptome reads to est database or is it more reasonable to assemble without mapping to a reference in this case? Thank you ...
est mapping transcriptome written 7.8 years ago by Bdv290 • updated 7.8 years ago by Wind0
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Galaxy- Combining 2 Queries
... hi I tried to combine 2 queries in galaxy and received the following error: sort: write failed: /tmp/sortKHo9Wg: No space left on device join: invalid file number in field spec: `-1' How this can be fixed? I worked on 454 data and created a SAM file there, then filtered for the reads which aligne ...
galaxy mapping written 8.0 years ago by Bdv290 • updated 8.0 years ago by Geparada1.4k
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Normalization Of Transcriptome 454
... Hi 1.Do I need to normalize the expression values calculated based on counting the reads in each gene for every sample according to house keeping genes? 2. When I perform blast2go for each sample and count the biological processes which were elevated in this specific sample, do I need to normalize t ...
data transcriptome written 8.0 years ago by Bdv290 • updated 5.5 years ago by Phil S.660
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Comment: C: More Than One Rs Number For Snp
... Thank you for the answers. An example of such a situation is rs35742686,rs4986774 which I believe to be the same... – bdv 0 secs ago ...
written 8.1 years ago by Bdv290
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Comment: C: More Than One Rs Number For Snp
... Thank you for the answers. An example of such a situation is rs35742686,rs4986774           which I believe to be the same... ...
written 8.1 years ago by Bdv290
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More Than One Rs Number For Snp
... Hi Why sometimes the same SNP has 2 completely different rs numbers? ...
snp identifiers written 8.1 years ago by Bdv290 • updated 8.1 years ago by User 35170
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(Closed) Ribosomal Sequences- Rrna Database
... hi I want to screen for rRNA sequences, where can I found a database for this? Thank you ...
rrna database written 8.1 years ago by Bdv290 • updated 8.1 years ago by Neilfws48k
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Blast2Go Graphs
... I perform blast in the blast2 go and then the GO and annotation steps. In previous projects I had the option to create "direct Go count" graphs on the process, function and component. I remember that there was such an option in the statistics>annotation statistics menu. However, I can't see those ...
annotation blast graph written 8.1 years ago by Bdv290 • updated 5.4 years ago by Biostar ♦♦ 20
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Comment: C: Blast2Go Statistics
... when I try to export the txt data from the graph I receive a message that there is no txt information to be exported... ...
written 8.1 years ago by Bdv290

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