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Comment: Comment: Fast QC results (per sequence GC content) - RNA seq
6 months ago by Trivas ★ 1.7k
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554
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Comment: Comment: Interpreting the CpG pearson correlation plot
6 months ago by Trivas ★ 1.7k
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1
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1.9k
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Comment: Comment: STAR Genome index Error
6 months ago by Trivas ★ 1.7k
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1
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1.9k
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Comment: Comment: STAR Genome index Error
6 months ago by Trivas ★ 1.7k
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662
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Answer: Answer: tximport error: vroom
6 months ago by Trivas ★ 1.7k
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0
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560
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Answer: Answer: DEG gene list and find common TF from public ChlP-Seq data
6 months ago by Trivas ★ 1.7k
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0
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555
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Answer: Answer: GOSt Plot
6 months ago by Trivas ★ 1.7k
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512
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Answer: Answer: How to import bigwig files into igvR
6 months ago by Trivas ★ 1.7k
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0
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659
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Comment: Comment: Subclustering of intergated cells from scRNA-seq data
6 months ago by Trivas ★ 1.7k
1
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1
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432
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Answer: Answer: Is it possible to convert 3 prime sequencing read counts into TPMs?
6 months ago by Trivas ★ 1.7k
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2
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1.2k
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Comment: Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool?
6 months ago by Trivas ★ 1.7k
0
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0
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656
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Comment: Comment: GO annotation in R using library(org.Hs.eg.db)
7 months ago by Trivas ★ 1.7k
2
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0
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525
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Answer: Answer: Normalisation on subset of genes
7 months ago by Trivas ★ 1.7k
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0
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1.6k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by Trivas ★ 1.7k
1
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0
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603
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Comment: Comment: Heatmap ChIP-seq average signal
7 months ago by Trivas ★ 1.7k
1
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1.1k
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Comment: Comment: Identifying transcription factors for a list of genes
7 months ago by Trivas ★ 1.7k
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0
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662
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Comment: Comment: Get the "average" of a column in a heatmap, combine 3 heatmaps into 1?
7 months ago by Trivas ★ 1.7k
2
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1
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548
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Answer: Answer: What to do after importing quantification with tximport
7 months ago by Trivas ★ 1.7k
2
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0
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499
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Comment: Comment: How to add value of column to barchart on hover?
7 months ago by Trivas ★ 1.7k
1
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1
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499
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Comment: Comment: How to add value of column to barchart on hover?
7 months ago by Trivas ★ 1.7k
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0
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522
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Comment: Comment: Zero Mapping rate
7 months ago by Trivas ★ 1.7k
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0
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1.4k
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Comment: Comment: Trimming of reads in miRNA-Seq data
7 months ago by Trivas ★ 1.7k
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1
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1.4k
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Comment: Comment: Trimming of reads in miRNA-Seq data
7 months ago by Trivas ★ 1.7k
0
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1
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2.0k
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Comment: Comment: Heatmap legend position change
8 months ago by Trivas ★ 1.7k
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1
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1.8k
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Comment: Comment: What to do about "outlier" values in volcano plot?
8 months ago by Trivas ★ 1.7k
2
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2
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648
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Answer: Answer: how to run ROSE to find super enhnacers-
8 months ago by Trivas ★ 1.7k
1
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0
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458
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Answer: Answer: W,M,R nucleotides
8 months ago by Trivas ★ 1.7k
0
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0
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592
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Comment: Comment: How to Detect Presence of HPV-33 in Sample Data (FASTQ, BAM, VCF on GRCh37)
8 months ago by Trivas ★ 1.7k
0
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0
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436
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Answer: Answer: Bowtie - multiple alignments and seed length vs read length in miRNA mapping
9 months ago by Trivas ★ 1.7k
2
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0
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471
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Answer: Answer: Calculate TMB from BAM file
9 months ago by Trivas ★ 1.7k
1
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2
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1.1k
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Comment: Comment: Double biological replication when using DESeq2
9 months ago by Trivas ★ 1.7k
0
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0
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612
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Comment: Comment: Convert with respect to first column (repeated values) into rows (transposon)
9 months ago by Trivas ★ 1.7k
0
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0
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1.2k
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Comment: Comment: bedtools coverage, Use “stdin”
9 months ago by Trivas ★ 1.7k
0
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1
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612
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Comment: Comment: Convert with respect to first column (repeated values) into rows (transposon)
9 months ago by Trivas ★ 1.7k
0
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0
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365
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Answer: Answer: How to add new coordinates to the existing .gtf annotation file
9 months ago by Trivas ★ 1.7k
0
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0
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603
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Answer: Answer: Lollipop plots for structural variation coordinates
9 months ago by Trivas ★ 1.7k
1
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1
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1.3k
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Comment: Comment: Comparing P-Values & FDR adjusted p-values between RNA-Seq experiments?
9 months ago by Trivas ★ 1.7k
0
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0
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751
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Comment: Comment: IsoformSwitchAnalyzeR Error in reading GTF file
9 months ago by Trivas ★ 1.7k
0
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1
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751
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Comment: Comment: IsoformSwitchAnalyzeR Error in reading GTF file
9 months ago by Trivas ★ 1.7k
0
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0
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613
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Answer: Answer: Is it possible to do standard GSEA in R?
10 months ago by Trivas ★ 1.7k
1
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1
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1.3k
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Comment: Comment: differential splicing between two groups for 5 genes
10 months ago by Trivas ★ 1.7k
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2
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1.3k
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Answer: Answer: differential splicing between two groups for 5 genes
10 months ago by Trivas ★ 1.7k
0
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1
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1.1k
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Comment: Comment: IsoformSwitchAnalyserR lmportR data warning.
10 months ago by Trivas ★ 1.7k
3
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0
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716
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Answer: Answer: Veen diagram in RNA-Seq
10 months ago by Trivas ★ 1.7k
1
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1
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491
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Best practice for normalizing sequencing depth for differential miRNA expression?
DESeq2 miRge3 normalization miRNA
updated 10 months ago by ★ 1.1k • written 10 months ago by ★ 1.7k
0
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2
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1.2k
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Answer: Answer: Providing multiple read files to Salmon
10 months ago by Trivas ★ 1.7k
3
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0
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887
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Answer: Answer: extreme high log2FoldChange in DESeq2 result
10 months ago by Trivas ★ 1.7k
0
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1
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1.3k
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Answer: Answer: A question about the raw RNA-seq processing workflow
10 months ago by Trivas ★ 1.7k
2
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1
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573
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Answer: Answer: I don't really understand what fold mean means
10 months ago by Trivas ★ 1.7k
1
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1
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1.0k
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Answer: Answer: How to get information about promoter from bulk-RNAseq?
10 months ago by Trivas ★ 1.7k
290 results • Page 2 of 6
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