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Issue converting VCF to MAF using snpEff annotations
vcf vcf2maf snpEff maf
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.3k
3
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4
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6.2k
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[Errno 8] Exec Format Error Using Tophat 1.3.1
tophat
updated 3.0 years ago by 20 • written 11.7 years ago by ★ 1.3k
0
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0
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3.5k
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Answer: A: How To Get A Full Proteome Of Helicobacter Pylori 26695.
updated 3.3 years ago by 38k • written 12.2 years ago by ★ 1.3k
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0
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4.3k
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Comment: C: Methods For Comparing Transcriptomes?
updated 3.5 years ago by 38k • written 11.5 years ago by ★ 1.3k
3
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1
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18k
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Answer: A: What % Of Reads Are You Usually Able To Align When Mapping Reads From Rna-Seq To
updated 3.5 years ago by 38k • written 11.5 years ago by ★ 1.3k
2
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0
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3.6k
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Answer: A: Human Transcriptome Mapping
updated 3.5 years ago by 38k • written 11.7 years ago by ★ 1.3k
3
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0
replies
5.7k
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Answer: A: Any Examples Of Mturk/Crowdsourcing Projects In Bioinformatics?
updated 3.5 years ago by 38k • written 11.7 years ago by ★ 1.3k
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0
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3.8k
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Answer: A: Amplicon Sequencing
updated 3.5 years ago by 38k • written 12.0 years ago by ★ 1.3k
1
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0
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4.2k
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Answer: A: Convert Blast Table With Hsps To Alignment
updated 3.5 years ago by 38k • written 12.0 years ago by ★ 1.3k
1
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0
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122k
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Comment: C: Is There A Free Alternative To Ingenuity Pathway Analysis?
updated 3.5 years ago by 38k • written 12.1 years ago by ★ 1.3k
2
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1
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5.0k
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Answer: A: Output File Format "6" - Blastplus - Gene Name ?
updated 3.5 years ago by 38k • written 12.1 years ago by ★ 1.3k
0
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0
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26k
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Comment: C: How To Retrieve A .Fastaq File From Sra Using Wget? (And Not Aspera)
updated 3.6 years ago by 38k • written 12.2 years ago by ★ 1.3k
0
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0
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2.5k
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Comment: C: Are There Any Caveats When Creating A Maf File For Music?
updated 4.2 years ago by 38k • written 8.1 years ago by ★ 1.3k
3
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1
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16k
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Answer: A: How To Determine The Version Used To Generate Solexa/Illumina Fastq Files?
updated 4.5 years ago by 38k • written 11.5 years ago by ★ 1.3k
3
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2
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5.2k
views
Analysis With Cufflinks (Cuffdiff) Of Genes With No Gene Expression In One Of The Samples.
cufflinks cuffdiff gene
updated 4.9 years ago by 20 • written 11.0 years ago by ★ 1.3k
0
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5
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2.2k
views
'Use Of Uninitialized Value' Message Using Solexaqa
illumina
updated 4.9 years ago by 20 • written 11.5 years ago by ★ 1.3k
2
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5
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2.7k
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is needed info (BAM and MAF) files for normal tissues in MUSIC?
music bam maf
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.3k
10
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8
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8.0k
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David For Rnaseq Data
gene rna
updated 8 months ago by 38k • written 11.2 years ago by ★ 1.3k
0
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0
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2.7k
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Comment: Comment: is needed info (BAM and MAF) files for normal tissues in MUSIC?
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.3k
9
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3
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6.5k
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Equivalent Blast And Blast+ Commands
blast blast
updated 8.8 years ago by ▴ 20 • written 11.7 years ago by ★ 1.3k
0
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0
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9.5k
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Answer: A: Vdb Field In Samtools
10.0 years ago by Marina Manrique ★ 1.3k
0
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0
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5.3k
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Comment: C: Prokaryotic Rnaseq Analysis-The Basics
10.9 years ago by Marina Manrique ★ 1.3k
0
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0
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5.3k
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Answer: A: Prokaryotic Rnaseq Analysis-The Basics
10.9 years ago by Marina Manrique ★ 1.3k
0
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0
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5.2k
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Comment: C: Analysis With Cufflinks (Cuffdiff) Of Genes With No Gene Expression In One Of Th
11.0 years ago by Marina Manrique ★ 1.3k
0
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0
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8.0k
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Comment: C: David For Rnaseq Data
11.2 years ago by Marina Manrique ★ 1.3k
0
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0
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3.1k
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Comment: C: What Is Your Experience With Igenomes?
11.4 years ago by Marina Manrique ★ 1.3k
7
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1
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10k
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Answer: Answer: Bacterial Annotation Pipeline
updated 10 weeks ago by 38k • written 11.4 years ago by ★ 1.3k
3
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0
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2.3k
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Answer: A: Where To Get Downloadable Annotated Microbial Transcriptome Sequences?
11.4 years ago by Marina Manrique ★ 1.3k
0
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0
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19k
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Comment: C: Fastq Quality Check
11.4 years ago by Marina Manrique ★ 1.3k
0
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0
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2.2k
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Comment: C: 'Use Of Uninitialized Value' Message Using Solexaqa
11.4 years ago by Marina Manrique ★ 1.3k
4
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1
reply
13k
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Answer: A: Most "Accurate" Gtf File For Cufflinks??
11.5 years ago by Marina Manrique ★ 1.3k
0
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0
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3.1k
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Comment: C: What Is Your Experience With Igenomes?
11.5 years ago by Marina Manrique ★ 1.3k
0
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0
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2.2k
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Comment: C: 'Use Of Uninitialized Value' Message Using Solexaqa
11.5 years ago by Marina Manrique ★ 1.3k
9
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4
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3.1k
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What Is Your Experience With Igenomes?
cufflinks tophat illumina
updated 11.5 years ago by 16k • written 11.5 years ago by ★ 1.3k
0
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0
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4.1k
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Comment: C: Velvetg: 'Killed' During ___/___ Nodes Visited
11.5 years ago by Marina Manrique ★ 1.3k
0
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0
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3.0k
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Comment: C: Cufflinks Ouput Tracking-File Status
11.5 years ago by Marina Manrique ★ 1.3k
0
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0
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4.1k
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Comment: C: Velvetg: 'Killed' During ___/___ Nodes Visited
11.5 years ago by Marina Manrique ★ 1.3k
2
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3
replies
3.0k
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Answer: A: Cufflinks Ouput Tracking-File Status
11.5 years ago by Marina Manrique ★ 1.3k
0
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0
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2.4k
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Comment: C: Bacterial Diversity Identification With Normalized Libraries?
11.5 years ago by Marina Manrique ★ 1.3k
2
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0
replies
4.5k
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Answer: A: Rna-Seq Tag Count
11.5 years ago by Marina Manrique ★ 1.3k
8
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0
replies
25k
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Answer: A: Links To Good Next Gen Sequence Analysis Training Courses And Centres
11.6 years ago by Marina Manrique ★ 1.3k
1
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0
replies
4.9k
views
Answer: A: How The Go Slim Sets Predefined By Go Consortium Are Created?
11.6 years ago by Marina Manrique ★ 1.3k
8
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4
replies
4.9k
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How The Go Slim Sets Predefined By Go Consortium Are Created?
gene
11.6 years ago by Marina Manrique ★ 1.3k
1
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0
replies
8.3k
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Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
11.6 years ago by Marina Manrique ★ 1.3k
0
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0
replies
8.3k
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Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
11.6 years ago by Marina Manrique ★ 1.3k
0
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0
replies
8.3k
views
Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
11.6 years ago by Marina Manrique ★ 1.3k
0
votes
8
replies
8.3k
views
Answer: A: Determining Fpkm Of De Novo Assembly Of Transcriptome
11.6 years ago by Marina Manrique ★ 1.3k
0
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0
replies
3.6k
views
Comment: C: Human Transcriptome Mapping
11.7 years ago by Marina Manrique ★ 1.3k
2
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1
reply
6.2k
views
Answer: A: [Errno 8] Exec Format Error Using Tophat 1.3.1
11.7 years ago by Marina Manrique ★ 1.3k
0
votes
0
replies
6.2k
views
Comment: C: [Errno 8] Exec Format Error Using Tophat 1.3.1
11.7 years ago by Marina Manrique ★ 1.3k
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