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The best tool for Scaffolding
contigs scaffold assembly spades
updated 10 weeks ago by ★ 2.6k • written 4 months ago by ▴ 50
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0
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
10 weeks ago by davidmaimoun ▴ 50
11
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18
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1.8k
views
6 follow
Interpreting phylogenetics tree
phylogenetic-tree itol phylogenetics
updated 10 days ago by ★ 1.6k • written 3 months ago by ▴ 50
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3
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
10 weeks ago by davidmaimoun ▴ 50
0
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0
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
11 weeks ago by davidmaimoun ▴ 50
0
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2
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
11 weeks ago by davidmaimoun ▴ 50
0
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0
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
11 weeks ago by davidmaimoun ▴ 50
0
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2
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
12 weeks ago by davidmaimoun ▴ 50
0
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0
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1.8k
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Comment: Comment: Interpreting phylogenetics tree
12 weeks ago by davidmaimoun ▴ 50
0
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0
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17k
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Comment: Comment: Generating consensus sequence from bam file
4 months ago by davidmaimoun ▴ 50
0
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1
reply
17k
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Comment: Comment: Generating consensus sequence from bam file
4 months ago by davidmaimoun ▴ 50
0
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0
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189
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Cannot Align My Consensus fasta
bcftools consensus alignment variant-calling
updated 4 months ago by 44k • written 4 months ago by ▴ 50
0
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1
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17k
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Comment: Comment: Generating consensus sequence from bam file
4 months ago by davidmaimoun ▴ 50
4
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7
replies
1.4k
views
COBS Indexing genomes - understand the output
indexing cobs genomes COBS
updated 4 months ago by • 0 • written 2.5 years ago by ▴ 50
0
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0
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364
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Comment: Comment: Minimum Spanning Tree for SNPs
5 months ago by davidmaimoun ▴ 50
0
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2
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364
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Minimum Spanning Tree for SNPs
mst matrix snp distance bowtie2
5 months ago by davidmaimoun ▴ 50
3
votes
4
replies
614
views
QC Analysis from Sanger sequencing
qc ab1 sanger
6 months ago by davidmaimoun ▴ 50
0
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0
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614
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Comment: Comment: QC Analysis from Sanger sequencing
6 months ago by davidmaimoun ▴ 50
0
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0
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614
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Comment: Comment: QC Analysis from Sanger sequencing
6 months ago by davidmaimoun ▴ 50
2
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8
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924
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Blastn for all bacteria genomes; create the db
blast blastn
updated 10 months ago by 148k • written 10 months ago by ▴ 50
0
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1
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924
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Comment: Comment: Blastn for all bacteria genomes; create the db
10 months ago by davidmaimoun ▴ 50
0
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1
reply
924
views
Comment: Comment: Blastn for all bacteria genomes; create the db
10 months ago by davidmaimoun ▴ 50
0
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0
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623
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Comment: Comment: Blastn - matches with another species
10 months ago by davidmaimoun ▴ 50
0
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1
reply
623
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Comment: Comment: Blastn - matches with another species
10 months ago by davidmaimoun ▴ 50
1
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4
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623
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Blastn - matches with another species
blast blastn
10 months ago by davidmaimoun ▴ 50
0
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0
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270
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Shovill running error 256
shovill
updated 11 months ago by 44k • written 11 months ago by ▴ 50
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0
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1.2k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
4
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8
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1.2k
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Parallelization of task according to the cpu capacity
parallelization cpu
11 months ago by davidmaimoun ▴ 50
0
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0
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1.2k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
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1.2k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
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1.2k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
replies
2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
0
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1
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2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
4
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8
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2.1k
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Docker: Pass reads file form host to container
docker
12 months ago by davidmaimoun ▴ 50
0
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0
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2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
3
votes
9
replies
2.9k
views
Nextflow - Wait for process ending to call the next one without output
nextflow
updated 13 months ago by ▴ 10 • written 17 months ago by ▴ 50
0
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4
replies
1.2k
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Average Coverage after Assembly (Spades)
coverage average assembly
updated 14 months ago by 20k • written 2.3 years ago by ▴ 50
0
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0
replies
600
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Comment: Comment: Chewbbaca - explanation of the output
16 months ago by davidmaimoun ▴ 50
0
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2
replies
600
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Chewbbaca - explanation of the output
chewbbaca
16 months ago by davidmaimoun ▴ 50
0
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0
replies
2.9k
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Comment: Comment: Nextflow - Wait for process ending to call the next one without output
16 months ago by davidmaimoun ▴ 50
0
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0
replies
2.9k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
16 months ago by davidmaimoun ▴ 50
0
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1
reply
2.9k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
17 months ago by davidmaimoun ▴ 50
0
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0
replies
1.8k
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Comment: Comment: Find Pathogenic Variants
20 months ago by davidmaimoun ▴ 50
3
votes
6
replies
1.8k
views
Find Pathogenic Variants
vcf variant-calling
20 months ago by davidmaimoun ▴ 50
0
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0
replies
1.8k
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Comment: Comment: Find Pathogenic Variants
20 months ago by davidmaimoun ▴ 50
0
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1
reply
1.8k
views
Comment: Comment: Find Pathogenic Variants
20 months ago by davidmaimoun ▴ 50
0
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1
reply
1.2k
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Comment: Comment: Average Coverage after Assembly (Spades)
2.3 years ago by davidmaimoun ▴ 50
0
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0
replies
382
views
Fetching schemes from pubMLST
Fetching pubMLST schemes cgMLST scheme
2.3 years ago by davidmaimoun ▴ 50
16
votes
10
replies
5.0k
views
Nextflow- cannot run bash script from Docker
script bash nextflow from docker
updated 2.4 years ago by 7.0k • written 2.4 years ago by ▴ 50
2
votes
0
replies
5.0k
views
Answer: Answer: Nextflow- cannot run bash script from Docker
2.4 years ago by davidmaimoun ▴ 50
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