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0
votes
3
replies
391
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The best tool for Scaffolding
contigs scaffold assembly spades
updated 10 weeks ago by ★ 2.6k • written 4 months ago by ▴ 50
11
votes
18
replies
1.8k
views
6 follow
Interpreting phylogenetics tree
phylogenetic-tree itol phylogenetics
updated 10 days ago by ★ 1.6k • written 3 months ago by ▴ 50
0
votes
0
replies
189
views
Cannot Align My Consensus fasta
bcftools consensus alignment variant-calling
updated 4 months ago by 44k • written 4 months ago by ▴ 50
4
votes
7
replies
1.4k
views
COBS Indexing genomes - understand the output
indexing cobs genomes COBS
updated 4 months ago by • 0 • written 2.5 years ago by ▴ 50
0
votes
2
replies
364
views
Minimum Spanning Tree for SNPs
mst matrix snp distance bowtie2
5 months ago by davidmaimoun ▴ 50
3
votes
4
replies
614
views
QC Analysis from Sanger sequencing
qc ab1 sanger
6 months ago by davidmaimoun ▴ 50
2
votes
8
replies
924
views
Blastn for all bacteria genomes; create the db
blast blastn
updated 10 months ago by 148k • written 10 months ago by ▴ 50
1
vote
4
replies
623
views
Blastn - matches with another species
blast blastn
10 months ago by davidmaimoun ▴ 50
0
votes
0
replies
270
views
Shovill running error 256
shovill
updated 11 months ago by 44k • written 11 months ago by ▴ 50
4
votes
8
replies
1.2k
views
Parallelization of task according to the cpu capacity
parallelization cpu
11 months ago by davidmaimoun ▴ 50
4
votes
8
replies
2.1k
views
Docker: Pass reads file form host to container
docker
12 months ago by davidmaimoun ▴ 50
3
votes
9
replies
2.9k
views
Nextflow - Wait for process ending to call the next one without output
nextflow
updated 13 months ago by ▴ 10 • written 17 months ago by ▴ 50
0
votes
4
replies
1.2k
views
Average Coverage after Assembly (Spades)
coverage average assembly
updated 14 months ago by 20k • written 2.3 years ago by ▴ 50
0
votes
2
replies
600
views
Chewbbaca - explanation of the output
chewbbaca
16 months ago by davidmaimoun ▴ 50
3
votes
6
replies
1.8k
views
Find Pathogenic Variants
vcf variant-calling
20 months ago by davidmaimoun ▴ 50
0
votes
0
replies
382
views
Fetching schemes from pubMLST
Fetching pubMLST schemes cgMLST scheme
2.3 years ago by davidmaimoun ▴ 50
16
votes
10
replies
5.0k
views
Nextflow- cannot run bash script from Docker
script bash nextflow from docker
updated 2.4 years ago by 7.0k • written 2.4 years ago by ▴ 50
2
votes
5
replies
1.2k
views
How can I estimate how many ressources needed before running a script?
available ressources cpu cores
2.4 years ago by davidmaimoun ▴ 50
0
votes
0
replies
376
views
POST sequences to pubMLST API
pubmlst restful api
2.4 years ago by davidmaimoun ▴ 50
3
votes
6
replies
1.1k
views
Determine my species from Isolates assemblies
blast
updated 2.0 years ago by 44k • written 2.4 years ago by ▴ 50
9
votes
14
replies
3.0k
views
6 follow
Downloading a huge amount of Fastq files
fastq
updated 20 months ago by 44k • written 2.5 years ago by ▴ 50
6
votes
15
replies
2.0k
views
The Best Cloud Solution For Genomics
cloud data-sharing genomics workflow
updated 2.4 years ago by 44k • written 2.5 years ago by ▴ 50
0
votes
3
replies
785
views
Build A Spanning Tree From Several Strains
strains wgmlst compare tree spanning
2.6 years ago by davidmaimoun ▴ 50
3
votes
5
replies
1.3k
views
Allele Calling with chewBBaCA
wgmlst cgmlst mlst chewbbaca allele calling
updated 2.7 years ago by ▴ 240 • written 2.7 years ago by ▴ 50
8
votes
4
replies
2.7k
views
Build Phylogenetic Tree from SNPs
SNPs Tree Build Phylogenetic msa
2.7 years ago by davidmaimoun ▴ 50
25 results • Page 1 of 1
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