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0
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379
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Contigs Input For Phylogenetic Tree
contigs phylogeny nextstrain phylogenetics
7 weeks ago by davidmaimoun ▴ 50
1
vote
2
replies
560
views
WDL 1.0 - Directory Type
directory input wdl
4 months ago by davidmaimoun ▴ 50
0
votes
0
replies
329
views
Hash-Based Allele Calling
calling hash allele
4 months ago by davidmaimoun ▴ 50
0
votes
3
replies
701
views
The best tool for Scaffolding
contigs scaffold assembly spades
updated 9 months ago by ★ 3.0k • written 12 months ago by ▴ 50
11
votes
18
replies
4.1k
views
6 follow
Interpreting phylogenetics tree
phylogenetic-tree itol phylogenetics
updated 7 months ago by ★ 1.7k • written 10 months ago by ▴ 50
0
votes
0
replies
407
views
Cannot Align My Consensus fasta
bcftools consensus alignment variant-calling
updated 11 months ago by 45k • written 11 months ago by ▴ 50
4
votes
7
replies
2.1k
views
COBS Indexing genomes - understand the output
indexing cobs genomes COBS
updated 11 months ago by • 0 • written 3.1 years ago by ▴ 50
0
votes
2
replies
780
views
Minimum Spanning Tree for SNPs
mst matrix snp distance bowtie2
12 months ago by davidmaimoun ▴ 50
3
votes
4
replies
1.1k
views
QC Analysis from Sanger sequencing
qc ab1 sanger
13 months ago by davidmaimoun ▴ 50
2
votes
8
replies
1.6k
views
Blastn for all bacteria genomes; create the db
blast blastn
updated 17 months ago by 152k • written 17 months ago by ▴ 50
1
vote
4
replies
951
views
Blastn - matches with another species
blast blastn
17 months ago by davidmaimoun ▴ 50
0
votes
0
replies
448
views
Shovill running error 256
shovill
updated 18 months ago by 45k • written 18 months ago by ▴ 50
4
votes
8
replies
1.8k
views
Parallelization of task according to the cpu capacity
parallelization cpu
18 months ago by davidmaimoun ▴ 50
4
votes
8
replies
3.2k
views
Docker: Pass reads file form host to container
docker
19 months ago by davidmaimoun ▴ 50
3
votes
9
replies
4.0k
views
Nextflow - Wait for process ending to call the next one without output
nextflow
updated 20 months ago by ▴ 10 • written 24 months ago by ▴ 50
0
votes
4
replies
1.6k
views
Average Coverage after Assembly (Spades)
coverage average assembly
updated 21 months ago by 20k • written 2.9 years ago by ▴ 50
0
votes
2
replies
878
views
Chewbbaca - explanation of the output
chewbbaca
24 months ago by davidmaimoun ▴ 50
3
votes
6
replies
2.5k
views
Find Pathogenic Variants
vcf variant-calling
2.3 years ago by davidmaimoun ▴ 50
0
votes
0
replies
517
views
Fetching schemes from pubMLST
Fetching pubMLST schemes cgMLST scheme
2.9 years ago by davidmaimoun ▴ 50
16
votes
10
replies
6.1k
views
Nextflow- cannot run bash script from Docker
script bash nextflow from docker
updated 3.0 years ago by 7.7k • written 3.0 years ago by ▴ 50
2
votes
5
replies
1.5k
views
How can I estimate how many ressources needed before running a script?
available ressources cpu cores
3.0 years ago by davidmaimoun ▴ 50
0
votes
0
replies
545
views
POST sequences to pubMLST API
pubmlst restful api
3.0 years ago by davidmaimoun ▴ 50
3
votes
6
replies
1.4k
views
Determine my species from Isolates assemblies
blast
updated 2.6 years ago by 45k • written 3.0 years ago by ▴ 50
9
votes
14
replies
4.1k
views
6 follow
Downloading a huge amount of Fastq files
fastq
updated 2.3 years ago by 45k • written 3.0 years ago by ▴ 50
6
votes
15
replies
2.6k
views
The Best Cloud Solution For Genomics
cloud data-sharing genomics workflow
updated 3.0 years ago by 45k • written 3.1 years ago by ▴ 50
0
votes
3
replies
1.0k
views
Build A Spanning Tree From Several Strains
strains wgmlst compare tree spanning
3.2 years ago by davidmaimoun ▴ 50
4
votes
5
replies
1.9k
views
Allele Calling with chewBBaCA
wgmlst cgmlst mlst chewbbaca allele calling
updated 3.3 years ago by ▴ 260 • written 3.3 years ago by ▴ 50
8
votes
4
replies
3.9k
views
Build Phylogenetic Tree from SNPs
SNPs Tree Build Phylogenetic msa
3.3 years ago by davidmaimoun ▴ 50
28 results • Page 1 of 1
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