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Showing :
questions
1
vote
3
replies
933
views
Source of soft clipped reads from target sequencing
clip
reads
soft
23 months ago by
yliueagle
▴ 290
3
votes
1
reply
849
views
Meaning of read color on IGV
IGV
updated 23 months ago by
Pierre Lindenbaum
161k • written 23 months ago by
yliueagle
▴ 290
7
votes
5
replies
2.7k
views
What does the black lines mean in the IGV track
IGV
2.4 years ago by
yliueagle
▴ 290
2
votes
4
replies
3.4k
views
Per base sequence content failed in fastQC
fastQC
updated 2.5 years ago by
GenoMax
141k • written 2.5 years ago by
yliueagle
▴ 290
0
votes
1
reply
582
views
Retrieve reads overlapping indels
variants
reads
indel
updated 2.8 years ago by
Medhat
9.7k • written 2.8 years ago by
yliueagle
▴ 290
1
vote
2
replies
2.2k
views
visualize phased vcf file
vcf
phasing
updated 3.1 years ago by
samuel.a.odonnell
▴ 520 • written 3.1 years ago by
yliueagle
▴ 290
0
votes
0
replies
1.1k
views
see base quality from IGV
igv
reads
updated 3.5 years ago by
ATpoint
82k • written 3.5 years ago by
yliueagle
▴ 290
0
votes
3
replies
770
views
many read aligned to the same position but with different variants
alignment
duplicates
reads
updated 3.5 years ago by
GenoMax
141k • written 3.5 years ago by
yliueagle
▴ 290
0
votes
1
reply
689
views
bowtie2 inpipe1 inpipe2
bowtie2
updated 3.7 years ago by
Ram
43k • written 3.7 years ago by
yliueagle
▴ 290
3
votes
7
replies
1.5k
views
Extract base information from aligned reads in a sam file
sam
basepair
reads
3.7 years ago by
yliueagle
▴ 290
0
votes
1
reply
950
views
Can not change track height of IGV
IGV
4.1 years ago by
yliueagle
▴ 290
6
votes
4
replies
5.3k
views
Intron and exon coordinates of all genes from Hg19
gene
intron
exon
cordinates
updated 4.4 years ago by
vkkodali_ncbi
★ 3.7k • written 4.4 years ago by
yliueagle
▴ 290
1
vote
2
replies
2.0k
views
gene coordinates from TxDb.Hsapiens.UCSC.hg19.knownGene do not match NCBI gene bank
gene
updated 4.6 years ago by
GenoMax
141k • written 4.6 years ago by
yliueagle
▴ 290
2
votes
5
replies
1.3k
views
What's the difference between "hg19" and "hg19 v19"
Assembly
RNA-Seq
5.1 years ago by
yliueagle
▴ 290
0
votes
2
replies
706
views
Gene expression: which allele is considered?
gene
expression
updated 5.5 years ago by
Devon Ryan
104k • written 5.5 years ago by
yliueagle
▴ 290
4
votes
2
replies
3.4k
views
Why low MAF leads to low power
MAF
POWER
SNP
updated 18 months ago by
Ram
43k • written 8.7 years ago by
yliueagle
▴ 290
1
vote
0
replies
3.6k
views
STRING combined score: a bug or else
protein-interaction
STRING
updated 16 months ago by
Ram
43k • written 8.8 years ago by
yliueagle
▴ 290
2
votes
1
reply
1.3k
views
position range of loci
Assembly
genome
updated 14 months ago by
Ram
43k • written 9.0 years ago by
yliueagle
▴ 290
0
votes
0
replies
1.5k
views
functional annotation of protein network
protein
gene
interaction network
annotation
9.0 years ago by
yliueagle
▴ 290
2
votes
1
reply
11k
views
DAVID: functional annotation chart result explanation
DAVID
updated 22 months ago by
Ram
43k • written 9.0 years ago by
yliueagle
▴ 290
0
votes
0
replies
2.0k
views
Cytoscape: display each node with two nested circles
cytoscape
9.1 years ago by
yliueagle
▴ 290
8
votes
4
replies
4.0k
views
GWAS: low explained heritability
GWAS
updated 24 months ago by
LauferVA
4.2k • written 9.3 years ago by
yliueagle
▴ 290
0
votes
3
replies
4.7k
views
GWAS dataset: SNPs with association p-value
GWAS
dataset
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
yliueagle
▴ 290
38
votes
6
replies
5.9k
views
6 follow
Why do genes have so many synonyms?
synonym
gene
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
yliueagle
▴ 290
8
votes
4
replies
4.1k
views
How to group genes as 'gene sets'
gene
group
updated 3.1 years ago by
Ram
43k • written 9.5 years ago by
yliueagle
▴ 290
8
votes
3
replies
5.7k
views
Different gene coding the same protein?
gene
protein
updated 3.1 years ago by
Ram
43k • written 9.5 years ago by
yliueagle
▴ 290
7
votes
2
replies
2.9k
views
protein interaction database
protein
database
interaction
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
yliueagle
▴ 290
14
votes
8
replies
3.2k
views
gene (or SNP) related to a disease
GWAS
snp
disease
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
yliueagle
▴ 290
8
votes
8
replies
11k
views
Map gene name to gene ID
gene
updated 2.3 years ago by
Ram
43k • written 9.8 years ago by
yliueagle
▴ 290
29 results • Page
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