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Comment: Comment: Multi-factor designs in DiffBind
4 months ago by Rory Stark ★ 2.0k
1
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0
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472
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Comment: Comment: Consensus peaksets in DiffBind - conceptual questinos
4 months ago by Rory Stark ★ 2.0k
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1
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472
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Answer: Answer: Consensus peaksets in DiffBind - conceptual questinos
4 months ago by Rory Stark ★ 2.0k
1
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1
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787
views
Answer: Answer: Multi-factor designs in DiffBind
4 months ago by Rory Stark ★ 2.0k
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0
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321
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Answer: Answer: CHIPSEQ Analysis , DiffBind Parameters
4 months ago by Rory Stark ★ 2.0k
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0
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742
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Comment: Comment: CHIPSEQ : Cut AND Run , DiffBind Parameters
4 months ago by Rory Stark ★ 2.0k
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0
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5.2k
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Comment: Comment: Which method is the best for using in "dba.count" in Diffbind R package
5 months ago by Rory Stark ★ 2.0k
1
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1
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484
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Answer: Answer: Diffbind low p-value but high FDR
5 months ago by Rory Stark ★ 2.0k
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0
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1.9k
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Comment: Comment: DiffBind dba.analyze never finishes
5 months ago by Rory Stark ★ 2.0k
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0
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2.5k
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Comment: Comment: Interpret plots from DiffBind
9 months ago by Rory Stark ★ 2.0k
1
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1
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700
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Answer: Answer: The bam file used for DiffBind?
9 months ago by Rory Stark ★ 2.0k
2
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1
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596
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Answer: Answer: How to compare peak profiles for a subset of ChIPseq genes
9 months ago by Rory Stark ★ 2.0k
2
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1
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4.9k
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Answer: Answer: Help with DiffBind Generating report-based DBA object... Error: No valid contras
9 months ago by Rory Stark ★ 2.0k
1
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1
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2.5k
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Comment: Comment: Interpret plots from DiffBind
10 months ago by Rory Stark ★ 2.0k
1
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2
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2.5k
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Comment: Comment: Interpret plots from DiffBind
10 months ago by Rory Stark ★ 2.0k
1
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1
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2.5k
views
Comment: Comment: Interpret plots from DiffBind
10 months ago by Rory Stark ★ 2.0k
1
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1
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2.5k
views
Comment: Comment: Interpret plots from DiffBind
10 months ago by Rory Stark ★ 2.0k
0
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0
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808
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Answer: Answer: How to interpret chipseq profile plot
10 months ago by Rory Stark ★ 2.0k
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0
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485
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Answer: Answer: Profile Plot looks strange
10 months ago by Rory Stark ★ 2.0k
2
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0
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769
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Answer: Answer: Sample sheet file for DiffBind
10 months ago by Rory Stark ★ 2.0k
2
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1
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2.5k
views
Answer: Answer: Interpret plots from DiffBind
10 months ago by Rory Stark ★ 2.0k
0
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1
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2.0k
views
Comment: Comment: DiffBind reports no significant differentially enriched peaks
10 months ago by Rory Stark ★ 2.0k
2
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1
reply
1.1k
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Answer: Answer: Diff Bind Questions
10 months ago by Rory Stark ★ 2.0k
2
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1
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862
views
Answer: Answer: CHiP-Seq Questions
10 months ago by Rory Stark ★ 2.0k
0
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0
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5.2k
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Comment: Comment: Which method is the best for using in "dba.count" in Diffbind R package
10 months ago by Rory Stark ★ 2.0k
0
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0
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766
views
Answer: Answer: Diffbind not calling sites as differentially bound
10 months ago by Rory Stark ★ 2.0k
1
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0
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651
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Answer: Answer: Positive and negative value fold value in ATAC seq using DiffBind
12 months ago by Rory Stark ★ 2.0k
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0
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2.0k
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Comment: Comment: Diffbind dba.count doesn't give FRiP score
10 months ago by Rory Stark ★ 2.0k
2
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1
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2.0k
views
Answer: Answer: Diffbind dba.count doesn't give FRiP score
12 months ago by Rory Stark ★ 2.0k
0
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1
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2.0k
views
Comment: Comment: Diffbind dba.count doesn't give FRiP score
13 months ago by Rory Stark ★ 2.0k
1
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0
replies
2.9k
views
Comment: Comment: DiffBind missing peaks and FRiP
13 months ago by Rory Stark ★ 2.0k
1
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1
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2.0k
views
Comment: Comment: Diffbind dba.count doesn't give FRiP score
13 months ago by Rory Stark ★ 2.0k
0
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0
replies
2.9k
views
Comment: Comment: DiffBind missing peaks and FRiP
13 months ago by Rory Stark ★ 2.0k
1
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1
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2.0k
views
Answer: Answer: Diffbind dba.count doesn't give FRiP score
13 months ago by Rory Stark ★ 2.0k
0
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1
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869
views
Answer: Answer: Diffbind: how to get raw read counts and normalized read counts
13 months ago by Rory Stark ★ 2.0k
1
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0
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2.0k
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Answer: Answer: DiffBind reports no significant differentially enriched peaks
13 months ago by Rory Stark ★ 2.0k
2
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0
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989
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Answer: Answer: Chip-seq Analysis
14 months ago by Rory Stark ★ 2.0k
0
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0
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1.3k
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Comment: Comment: DiffBind analysis report gives me two different outputs depending on when I appl
14 months ago by Rory Stark ★ 2.0k
1
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1
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676
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Answer: Answer: Strange results from Diffbind-Deseq2 differential peak binding of cfChip-seq wit
updated 15 months ago by 43k • written 15 months ago by ★ 2.0k
0
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0
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865
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Answer: Answer: Pipeline for quantitative ATAC-seq
15 months ago by Rory Stark ★ 2.0k
0
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0
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1.7k
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Answer: Answer: DiffBind error: No contrasts added. There must be at least two sample groups wit
16 months ago by Rory Stark ★ 2.0k
0
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0
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1.0k
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Answer: Answer: RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
16 months ago by Rory Stark ★ 2.0k
0
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0
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2.7k
views
Comment: Comment: DiffBind dba.count() BiocParallel error
16 months ago by Rory Stark ★ 2.0k
1
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1
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1.1k
views
Answer: Answer: Diffbind raw read counts
18 months ago by Rory Stark ★ 2.0k
0
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0
replies
1.0k
views
Comment: Comment: How to extract binding affinity matrix in Diffbind
18 months ago by Rory Stark ★ 2.0k
0
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1
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1.0k
views
Answer: Answer: How to extract binding affinity matrix in Diffbind
18 months ago by Rory Stark ★ 2.0k
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0
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4.2k
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Comment: Comment: New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
19 months ago by Rory Stark ★ 2.0k
6
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7
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4.2k
views
News: New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
DiffBind ChIP-seq deepTools visualization ATAC-seq
19 months ago by Rory Stark ★ 2.0k
2
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0
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4.2k
views
Answer: Answer: ChIPQC BiocParallel errors
21 months ago by Rory Stark ★ 2.0k
0
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0
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2.7k
views
Answer: Answer: DiffBind dba.count() BiocParallel error
20 months ago by Rory Stark ★ 2.0k
194 results • Page 1 of 4
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