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Answer: Answer: TMM normalization and sex effect
2.6 years ago by Rory Stark ★ 2.0k
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1.3k
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Answer: Answer: DiffBind: dba.plotProfile() Change sample order
2.7 years ago by Rory Stark ★ 2.0k
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0
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3.2k
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Answer: Answer: Preparing ChIP-seq data for analysis with DESeq2
2.7 years ago by Rory Stark ★ 2.0k
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2
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2.8k
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Answer: Answer: Error in DiffBind. Please HELP!
2.7 years ago by Rory Stark ★ 2.0k
6
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3
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5.1k
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Answer: Answer: Which method is the best for using in "dba.count" in Diffbind R package
2.8 years ago by Rory Stark ★ 2.0k
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0
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5.2k
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Answer: Answer: DiffBind 3.2 error
2.8 years ago by Rory Stark ★ 2.0k
2
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0
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1.4k
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Answer: Answer: Binding matrix created by DiffBind
2.8 years ago by Rory Stark ★ 2.0k
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1
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2.4k
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Answer: Answer: Diffbind:dba.plotProfile error: each range must have an end that is greater or e
2.9 years ago by Rory Stark ★ 2.0k
0
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1
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5.2k
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Answer: Answer: DiffBind 3.2 error
2.9 years ago by Rory Stark ★ 2.0k
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0
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2.3k
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Answer: Answer: Does DiffBind correctly designate peaks with very small fold-change to be signif
2.9 years ago by Rory Stark ★ 2.0k
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0
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801
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Answer: Answer: Comparing differentially expressed peaks to get unique values
2.9 years ago by Rory Stark ★ 2.0k
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1.4k
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Answer: Answer: Different batches of Chipseq data
2.9 years ago by Rory Stark ★ 2.0k
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1
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5.2k
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Answer: Answer: DiffBind 3.2 error
2.9 years ago by Rory Stark ★ 2.0k
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1
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3.0k
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Answer: Answer: Bam files not accepted in dba.count
2.9 years ago by Rory Stark ★ 2.0k
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1
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1.2k
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Answer: Answer: How exactly does diffBind count reads?
2.9 years ago by Rory Stark ★ 2.0k
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1.9k
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Answer: Answer: Diffbind fold difference calculation
2.9 years ago by Rory Stark ★ 2.0k
2
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0
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1.5k
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Answer: Answer: Understanding PCA plot from DiffBind
2.9 years ago by Rory Stark ★ 2.0k
1
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0
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997
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Answer: Answer: How to obtain FDR across all regions investigated in DiffBind
3.0 years ago by Rory Stark ★ 2.0k
0
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0
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959
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Answer: Answer: DiffBind - dba.report concentration value question
3.0 years ago by Rory Stark ★ 2.0k
2
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1
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977
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Answer: A: Diffbind-weird Fold value
3.1 years ago by Rory Stark ★ 2.0k
2
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2
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1.6k
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Answer: A: DiffBind analysis - minCount parameter in dba.count()
3.1 years ago by Rory Stark ★ 2.0k
2
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0
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840
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Answer: A: Major issue with DiffBind 3?
3.2 years ago by Rory Stark ★ 2.0k
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0
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1.9k
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Answer: A: DiffBind dba.analyze never finishes
3.2 years ago by Rory Stark ★ 2.0k
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1
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1.3k
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Answer: A: DiffBind consensus peak set query
3.2 years ago by Rory Stark ★ 2.0k
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2
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2.3k
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Answer: A: Diffbind3 dba.plotMA error
3.3 years ago by Rory Stark ★ 2.0k
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0
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1.1k
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Answer: A: ChIP-seq normalization method when global loss of signal is expected.
3.3 years ago by Rory Stark ★ 2.0k
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0
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749
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Answer: A: CHIP Seq Analysis by DiffBind Package
3.4 years ago by Rory Stark ★ 2.0k
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1
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3.7k
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Answer: A: ChIP-seq or Cut and Run Differential Binding Analysis
3.4 years ago by Rory Stark ★ 2.0k
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0
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1.1k
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Answer: A: How is chip seq quantitative?
3.5 years ago by Rory Stark ★ 2.0k
1
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1
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3.7k
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Answer: A: ChIP-seq or Cut and Run Differential Binding Analysis
3.5 years ago by Rory Stark ★ 2.0k
1
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0
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721
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Answer: A: CHIP Seq Analysis by DiffBind Package
3.5 years ago by Rory Stark ★ 2.0k
0
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0
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1.5k
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Answer: A: MultiBamSummary for correlating ChIPseq datasets
3.5 years ago by Rory Stark ★ 2.0k
1
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0
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1.5k
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Answer: A: DiffBind Count reads from paired end bamfiles
3.5 years ago by Rory Stark ★ 2.0k
1
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0
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3.5k
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Answer: A: Consensus Peakset DIffBind
3.6 years ago by Rory Stark ★ 2.0k
0
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1
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2.7k
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Answer: A: Loading sample sheet in DiffBind
3.6 years ago by Rory Stark ★ 2.0k
2
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2
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1.4k
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Answer: A: how matrix composition influences the final results in diff bind
3.6 years ago by Rory Stark ★ 2.0k
0
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0
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1.2k
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Answer: A: Comparing peaks between multiple samples
3.7 years ago by Rory Stark ★ 2.0k
0
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1
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1.2k
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Answer: A: Comparing peaks between multiple samples
3.7 years ago by Rory Stark ★ 2.0k
0
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0
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1.3k
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Answer: A: diffBind dba.count error for a peaks file selected
3.8 years ago by Rory Stark ★ 2.0k
2
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1
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1.4k
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Answer: A: Extract RPKM values from Diffbind
3.8 years ago by Rory Stark ★ 2.0k
2
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0
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1.1k
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Answer: A: are there some tools or software can find the different peak of ATAC-seq
3.8 years ago by Rory Stark ★ 2.0k
2
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1
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1.4k
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Answer: A: Extract RPKM values from Diffbind
3.8 years ago by Rory Stark ★ 2.0k
0
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0
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983
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Answer: A: why DiffBind, diffferentially binding site is the for different samples
3.8 years ago by Rory Stark ★ 2.0k
1
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0
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2.7k
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Answer: A: How to make complex contrasts in DiffBind dba.contrast
3.8 years ago by Rory Stark ★ 2.0k
2
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1
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1.4k
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Answer: A: DiffBind gives peaks of different widths, even when setting "summits"
3.8 years ago by Rory Stark ★ 2.0k
0
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3
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4.4k
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Answer: A: DiffBind error when calling dba.count
3.9 years ago by Rory Stark ★ 2.0k
2
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2
replies
2.9k
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Answer: A: Difference of DiffBind library size normalisation vs DESeq2 library size normali
4.0 years ago by Rory Stark ★ 2.0k
1
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0
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1.2k
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Answer: A: Obtained too many chip-seq peaks after diffbind, how to set a criteria to select
4.0 years ago by Rory Stark ★ 2.0k
1
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2
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1.4k
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Answer: A: Error while invoking. dba.analyze() in DiffBind
4.0 years ago by Rory Stark ★ 2.0k
0
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1
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2.0k
views
Answer: A: ChIP seq: Trying to use ChIPQC to measure quality of reads
4.0 years ago by Rory Stark ★ 2.0k
123 results • Page 2 of 3
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