User: julia

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julia20
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Posts by julia

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Comment: C: WGCNA with time series data
... Thank you for responding to my question, Ying. Yes, I was referring to Steve Horvath's Yeast tutorial. Very early in the tutorial, prior to the identification of eigengenes, an adjacency matrix is created using the WGCNA adjacency function (http://www.inside-r.org/packages/cran/WGCNA/docs/adjacency) ...
written 5.5 years ago by julia20
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WGCNA with time series data
... I have been going through a set of tutorials on WGCNA for building weighted gene co-expression networks. One particular tutorial uses Yeast expression data collected over 44 time points across cell cycles. To create an adjacency matrix, a Pearson correlation is calculated for each pair of genes usin ...
gene R next-gen rna-seq written 5.5 years ago by julia20 • updated 2.6 years ago by Biostar ♦♦ 20

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