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8
votes
0
replies
9.2k
views
Answer: A: Sort Multiple Fasta Numerically
updated 3.1 years ago by 81k • written 12.1 years ago by 33k
7
votes
6
replies
17k
views
Answer: Answer: Choosing Random Set Of Seqs From Larger Set
updated 24 months ago by 43k • written 12.1 years ago by 33k
4
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0
replies
11k
views
Answer: A: parse large vcf file?
updated 4.3 years ago by 43k • written 9.9 years ago by 33k
2
votes
1
reply
3.5k
views
Answer: A: BWA and SOAP2 cannot map a particular sequence which exists in the genome
updated 4.3 years ago by 43k • written 10.0 years ago by 33k
54
votes
11
replies
60k
views
Answer: A: How To Efficiently Parse A Huge Fastq File?
updated 4.3 years ago by 43k • written 12.7 years ago by 33k
3
votes
1
reply
21k
views
Answer: A: Vcf Sort According To Order Of The Reference File
updated 4.3 years ago by 43k • written 10.4 years ago by 33k
9
votes
1
reply
144k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.4 years ago by 43k • written 11.2 years ago by 33k
4
votes
0
replies
7.4k
views
Answer: A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
updated 4.4 years ago by 43k • written 11.2 years ago by 33k
13
votes
1
reply
16k
views
Answer: A: GFA to Fasta file
updated 4.4 years ago by 43k • written 8.4 years ago by 33k
7
votes
1
reply
7.6k
views
Answer: A: Samtofastq: Net.Sf.Picard.Picardexception: "Found N Unpaired Mates "
updated 4.4 years ago by 43k • written 11.0 years ago by 33k
10
votes
1
reply
61k
views
Answer: A: How To Sort Bed Format File
updated 4.4 years ago by 43k • written 11.2 years ago by 33k
6
votes
1
reply
5.0k
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Answer: A: Lack of consensus between NGS & Sanger sequencing on indels/mutations
updated 4.4 years ago by 43k • written 8.4 years ago by 33k
3
votes
0
replies
5.9k
views
Answer: A: Extract Flanking Region Of A Snp
updated 4.4 years ago by 43k • written 12.7 years ago by 33k
4
votes
0
replies
9.8k
views
Answer: A: Insert Length Vs Nominal Length For Paired-End Data
updated 4.4 years ago by 43k • written 12.6 years ago by 33k
25
votes
6
replies
4.3k
views
Answer: A: Does Pre-Publishing Open Source Algorithms Hurt Chances Of Getting Published?
updated 4.4 years ago by 43k • written 12.6 years ago by 33k
4
votes
14
replies
7.1k
views
Answer: A: Dbsnp Individual Genotyping Information For Specific Snps
updated 4.4 years ago by 43k • written 13.1 years ago by 33k
3
votes
1
reply
8.9k
views
Answer: A: DNA composition - all k-mers and their frequency in some sequencing data
updated 4.4 years ago by 43k • written 8.4 years ago by 33k
2
votes
1
reply
2.4k
views
Answer: A: How to parse genebank file using swift for OSX ?
updated 4.4 years ago by 43k • written 8.5 years ago by 33k
10
votes
1
reply
4.5k
views
Answer: A: Why aren't Hamiltonian paths used in genome assembly?
updated 4.4 years ago by 43k • written 8.6 years ago by 33k
28
votes
3
replies
31k
views
Answer: A: Why are we still using Bam files? And not Cram, HDF5 or improved Bam files?
updated 4.5 years ago by 43k • written 9.8 years ago by 33k
7
votes
0
replies
11k
views
Answer: A: Bowtie Vs Bwa For Indels
updated 4.5 years ago by 43k • written 10.0 years ago by 33k
2
votes
2
replies
10k
views
Answer: A: Compare A Denovo Assembly To The Reference Genome
updated 4.5 years ago by 43k • written 10.4 years ago by 33k
5
votes
1
reply
4.0k
views
Answer: A: Are Some Sequences Uniquely Mapped By Bwa When Mapped As Paired-End That Would N
updated 4.5 years ago by 43k • written 11.0 years ago by 33k
2
votes
1
reply
5.6k
views
Answer: A: Local Alignment Of Short Reads: Mosaik, Bowtie2, Bwa?
updated 4.5 years ago by 43k • written 11.0 years ago by 33k
6
votes
0
replies
8.5k
views
Answer: A: Distributed Computing In Bioinformatics
updated 4.5 years ago by 43k • written 11.1 years ago by 33k
7
votes
0
replies
8.1k
views
Answer: A: Method To Identify Viral Integration Site In Human Genome From Ngs Data?
updated 4.5 years ago by 43k • written 11.1 years ago by 33k
10
votes
2
replies
16k
views
Answer: A: Split Read Mapping By Bwa And Bowtie2
updated 4.5 years ago by 43k • written 11.2 years ago by 33k
6
votes
1
reply
4.2k
views
Answer: A: Alignment Software To Only Find Number Of Short Read Alignments?
updated 4.5 years ago by 43k • written 11.2 years ago by 33k
2
votes
0
replies
4.0k
views
Answer: A: Snps And Indels In Homozygous Genomes
updated 4.5 years ago by 43k • written 11.9 years ago by 33k
8
votes
0
replies
20k
views
Answer: A: Counting N'S Within Fasta
updated 4.6 years ago by 43k • written 12.1 years ago by 33k
18
votes
0
replies
37k
views
Answer: A: Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs D
updated 4.6 years ago by 43k • written 12.1 years ago by 33k
15
votes
6
replies
38k
views
Answer: A: Efficient And Fastest Way To Sort Large (>100Gb) Bam Files?
updated 4.6 years ago by 43k • written 12.1 years ago by 33k
11
votes
7
replies
6.3k
views
Answer: A: Largest Bioinformatics Software Project?
updated 4.6 years ago by 43k • written 13.1 years ago by 33k
2
votes
0
replies
2.5k
views
Answer: A: List Of Ftp Urls For Bam Files From 1000G Project With Read Length Above 70 And
updated 4.6 years ago by 43k • written 12.2 years ago by 33k
12
votes
0
replies
13k
views
Answer: A: Should We Attempt To Redefine The Cigar String In Sam/Bam Format?
updated 4.6 years ago by 43k • written 12.2 years ago by 33k
2
votes
3
replies
25k
views
Answer: A: Efficiently Iterating Over Fastq Records From Python
updated 4.6 years ago by 43k • written 12.4 years ago by 33k
5
votes
1
reply
9.5k
views
Answer: A: Perl Program For Reading Fastq Format Files
updated 4.6 years ago by 43k • written 12.6 years ago by 33k
11
votes
0
replies
12k
views
Answer: A: How To Calculated Coverage Of The Genome/Contig Slice?
updated 4.6 years ago by 43k • written 13.1 years ago by 33k
7
votes
4
replies
11k
views
Answer: A: How To Efficiently Remove Snps That Are Present In All Samples?
updated 4.6 years ago by 43k • written 13.1 years ago by 33k
62
votes
7
replies
87k
views
Answer: A: Selecting Random Pairs From Fastq?
updated 4.6 years ago by 43k • written 12.0 years ago by 33k
4
votes
2
replies
6.1k
views
Answer: A: I Need A List Of Bayesian Snp/Genotype Callers
updated 4.6 years ago by 43k • written 13.2 years ago by 33k
6
votes
1
reply
19k
views
Answer: A: How To Split A .Vcf.Gz File
updated 4.6 years ago by 43k • written 13.2 years ago by 33k
0
votes
13
replies
8.0k
views
Answer: A: Should We Be Using Much More Json In Our Delimited Data Formats?
updated 4.6 years ago by 43k • written 13.2 years ago by 33k
2
votes
0
replies
3.7k
views
Answer: A: Algorithms Accuracy Vs Compute Requirements
updated 4.6 years ago by 43k • written 13.3 years ago by 33k
9
votes
2
replies
8.6k
views
Answer: A: Exome Sequencing: Masking The Non-Genic Sequences ?
updated 4.6 years ago by 43k • written 13.4 years ago by 33k
4
votes
2
replies
5.9k
views
Answer: A: C Api For Bam: Iterating Over A Cigar String.
updated 4.6 years ago by 43k • written 13.4 years ago by 33k
2
votes
1
reply
17k
views
Answer: A: Should Samtools Pileup Be Performed On Uniquely Mapped Reads Or All The Reads?
updated 4.7 years ago by 43k • written 13.5 years ago by 33k
6
votes
0
replies
18k
views
Answer: A: Trimming Algorithm
updated 5.6 years ago by 43k • written 12.3 years ago by 33k
25
votes
6
replies
123k
views
Answer: A: Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
updated 5.6 years ago by 43k • written 13.4 years ago by 33k
4
votes
4
replies
30k
views
Answer: A: C/C++ Libraries For Bioinformatics?
updated 5.6 years ago by 43k • written 13.5 years ago by 33k
324 results • Page 1 of 7
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