User: Camilla
Camilla • 10
- Reputation:
- 10
- Status:
- New User
- Location:
- European Union
- Last seen:
- 4 months, 1 week ago
- Joined:
- 5 years, 1 month ago
- Email:
- c*****************@gmail.com
Posts by Camilla
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0
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1
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... Thank you very much Chirag for the solution !
Now it works!
...
written 4 months ago by
Camilla • 10
3
votes
1
answer
399
views
1
answer
... Hi everyone,
I am very new in environment R.
I am trying to obtain a final fasta file selecting a subset of sequences from a downloaded fasta file, using seqinr.
For this purpose I type the following script:
myfasta<- read.fasta(file = "MRP2.fas", seqtype = "AA",as.string = TRUE, set.attrib ...
0
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5
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12k
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5
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... I also tried with "hsp.expect <100"
...but is the same
:(
...
written 5.1 years ago by
Camilla • 10
7
votes
5
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12k
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11 follow
5
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... Dear all,
I am new to Biopython and have tried to parse my output blast file.
My script is:
from Bio.Blast import NCBIXML
result=open("blast_anoC.xml","r")
records= NCBIXML.parse(result)
item=next(records)
for alignment in item.alignments:
for hsp in alignment.hsps:
if ...
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