User: liruiradiant

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liruiradiant10
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New User
Location:
United States
Last seen:
3 months, 1 week ago
Joined:
5 years, 6 months ago
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Posts by liruiradiant

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Comment: A: bigwig to peak
... I ran into the same goal. However, I believe this is not working, as the bigwig might not be properly normalized the way that MACS does it ...
written 10 months ago by liruiradiant10
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Answer: A: Quantifying overlapping RNA-seq paired-end reads
... Yes, you can use the `-p` option to get Fragment counts, if you don't do so, you get read counts, which is twice the amount ...
written 16 months ago by liruiradiant10
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Forum: Review of the EVAL package (generating stats for GTF files)
... In my recent research, I tried to use 'EVAL' to generate some statistics for the genome annotation file generated from a cufflinks -> TransDecoder pipeline. However, I found this package disappointing. ---------- **My high expectations:** The Eval package had very detailed documents and prom ...
software error assembly forum blog written 3.7 years ago by liruiradiant10 • updated 3.5 years ago by Istvan Albert ♦♦ 81k

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Popular Question 9 months ago, created a question with more than 1,000 views. For Review of the EVAL package (generating stats for GTF files)

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