User: itsthegodzgarbage

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Posts by itsthegodzgarbage

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Answer: A: K-mers using JEllyfish
... Thanks Rob. Eventually I just used a simple python script:) ...
written 5.2 years ago by itsthegodzgarbage10
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K-mers using JEllyfish
... Hi, I am trying to find all k-mers in my fasta files. For eg if the sequence is AAATTCCGGGGGAAAA , if I want all k-mers with k=3 , it should return 64 values from what I expect. I can write a simple python script to do this but I am dealing with lot of data and wanted to use Jellyfish. It works wel ...
counters sequence k-mers jellyfish written 5.2 years ago by itsthegodzgarbage10 • updated 2.1 years ago by SmallChess490

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