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2
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1
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8.5k
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Comment: C: How to change cellranger multimapping algorithm
4.5 years ago by Rob 7.1k
1
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1
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8.5k
views
Comment: C: How to change cellranger multimapping algorithm
4.5 years ago by Rob 7.1k
2
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0
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2.7k
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Comment: C: RNA-Seq junction reads overhang imbalance
4.5 years ago by Rob 7.1k
3
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0
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2.7k
views
Answer: C: Quantify Isoforms in RNA-Seq data
4.6 years ago by Rob 7.1k
10
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1
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11k
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Answer: A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
4.7 years ago by Rob 7.1k
11
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0
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11k
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Answer: A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
4.7 years ago by Rob 7.1k
2
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0
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8.3k
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Comment: C: update salmon with conda
4.7 years ago by Rob 7.1k
2
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1
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8.3k
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Answer: A: update salmon with conda
4.7 years ago by Rob 7.1k
1
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0
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12k
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Comment: C: How does salmon deal with decoy?
4.7 years ago by Rob 7.1k
15
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2
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12k
views
Comment: C: How does salmon deal with decoy?
4.8 years ago by Rob 7.1k
4
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1
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3.3k
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Answer: A: Gibbs sampling/bootstrap replicates in Salmon
4.8 years ago by Rob 7.1k
0
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1
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2.4k
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Comment: C: Transcripts with no read support
4.8 years ago by Rob 7.1k
0
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2
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2.4k
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Comment: C: Transcripts with no read support
4.8 years ago by Rob 7.1k
2
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1
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4.8k
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Answer: A: How can I align single RNA seq(scRNAseq) data by using STAR or another aligner?
4.8 years ago by Rob 7.1k
2
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1
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2.1k
views
Answer: A: rsem-simulate-reads: simulating different data
4.8 years ago by Rob 7.1k
14
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1
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12k
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Answer: A: How does salmon deal with decoy?
4.8 years ago by Rob 7.1k
3
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1
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2.2k
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Answer: A: How to get different isoform's counts in different cell by using alevin (salmon
4.9 years ago by Rob 7.1k
0
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0
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1.9k
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Comment: C: Salmon or Kallisto without reference transcriptome - possible?
4.9 years ago by Rob 7.1k
2
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0
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1.3k
views
Answer: A: Trimmomatic and Salmon error
4.9 years ago by Rob 7.1k
1
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1
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2.5k
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Comment: C: Salmon building index and quantifying mapping questions
5.0 years ago by Rob 7.1k
0
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0
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2.5k
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Comment: C: Salmon building index and quantifying mapping questions
5.0 years ago by Rob 7.1k
1
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1
reply
3.9k
views
Comment: C: minimap2: aligning multiple regions to a read in a fastq
5.0 years ago by Rob 7.1k
3
votes
1
reply
3.4k
views
Answer: A: Transcript level counts from full length scRNA data
5.0 years ago by Rob 7.1k
0
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1
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5.6k
views
Comment: C: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
5.1 years ago by Rob 7.1k
2
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1
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5.6k
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Answer: A: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
5.1 years ago by Rob 7.1k
3
votes
0
replies
4.3k
views
Answer: A: Question related to time complexity of Needleman-Wunsch Algorithm
5.1 years ago by Rob 7.1k
0
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0
replies
1.3k
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Comment: C: Tool for computing all solutions to the small parsimony problem
5.1 years ago by Rob 7.1k
2
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0
replies
2.5k
views
Comment: C: having trouble running Salmon in anaconda prompt
5.2 years ago by Rob 7.1k
0
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0
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2.5k
views
Comment: C: having trouble running Salmon in anaconda prompt
5.2 years ago by Rob 7.1k
1
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1
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2.8k
views
Comment: C: hisat2 salmon alignment error
5.2 years ago by Rob 7.1k
1
vote
1
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2.8k
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Answer: A: hisat2 salmon alignment error
5.2 years ago by Rob 7.1k
0
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0
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1.2k
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Comment: C: parameters mapping in salmon software
5.3 years ago by Rob 7.1k
0
votes
0
replies
1.2k
views
Comment: C: parameters mapping in salmon software
5.3 years ago by Rob 7.1k
1
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2
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2.4k
views
Comment: C: can salmon distinguish similar transcript?
5.3 years ago by Rob 7.1k
5
votes
3
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2.4k
views
Answer: C: can salmon distinguish similar transcript?
5.3 years ago by Rob 7.1k
5
votes
1
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4.9k
views
Answer: A: warning when creating salmon index from GENCODE transcriptome
5.3 years ago by Rob 7.1k
2
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1
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1.7k
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Answer: C: Salmon only processes human reads from PDX data
5.4 years ago by Rob 7.1k
2
votes
2
replies
5.8k
views
Comment: C: Sailfish TPM normalization: does it take into account the size the library?
updated 5.4 years ago by 45k • written 9.4 years ago by 7.1k
1
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1
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3.4k
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Comment: C: Can k-tuple(k-mer/k-word) methods apply to reads generated from next-generation
updated 5.4 years ago by 45k • written 11.0 years ago by 7.1k
2
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0
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7.7k
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Comment: C: confusion in the DeBruijn Graph
updated 5.4 years ago by 45k • written 9.4 years ago by 7.1k
1
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1
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7.7k
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Comment: C: confusion in the DeBruijn Graph
updated 5.4 years ago by 45k • written 9.4 years ago by 7.1k
6
votes
2
replies
49k
views
Answer: A: Up-to-date Online RNA Sequence Analysis Training/Courses/Papers?
updated 5.4 years ago by 45k • written 9.4 years ago by 7.1k
3
votes
0
replies
8.0k
views
Answer: A: K-mers using JEllyfish
updated 5.5 years ago by 45k • written 11.0 years ago by 7.1k
2
votes
0
replies
6.2k
views
Comment: C: align shortreads using R
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
1
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0
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7.7k
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Comment: C: confusion in the DeBruijn Graph
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
5
votes
1
reply
5.8k
views
Answer: A: Sailfish TPM normalization: does it take into account the size the library?
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
1
vote
0
replies
7.7k
views
Comment: C: confusion in the DeBruijn Graph
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
4
votes
4
replies
7.7k
views
Answer: A: confusion in the DeBruijn Graph
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
0
votes
1
reply
8.5k
views
Comment: C: TPM or FPKM as input values for PCA and WGCNA?
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
3
votes
1
reply
5.0k
views
Comment: C: best workflow for RNA data analysis without replications
updated 5.5 years ago by 45k • written 9.4 years ago by 7.1k
364 results • Page 3 of 8
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