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1.2k
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Comment: C: inconsistent results of rsem quantification
4.7 years ago by Rob 6.5k
2
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1.3k
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Answer: A: Does salmon use phred scores while pseudoaligning (and/or validating mapping)?
5.0 years ago by Rob 6.5k
1
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1
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1.9k
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Answer: C: do paired end reads both mapped to the same gene appear consecutive to each othe
5.0 years ago by Rob 6.5k
6
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5.0k
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Answer: C: Salmon (quant.sf) to txtimport
5.1 years ago by Rob 6.5k
0
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1
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5.7k
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Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
0
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1
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5.7k
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Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
1
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1
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5.7k
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Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
1
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1
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5.7k
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Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
2
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1
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5.7k
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Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
3
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1
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5.7k
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Answer: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
0
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1
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7.4k
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Comment: C: Salmon transcriptome generation
5.1 years ago by Rob 6.5k
5
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3
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7.4k
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Answer: A: Salmon transcriptome generation
5.1 years ago by Rob 6.5k
0
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4.4k
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Comment: C: Salmon Counts differ in Alignment and Quasi-Mapping mode
5.2 years ago by Rob 6.5k
5
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2
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4.4k
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Answer: A: Salmon Counts differ in Alignment and Quasi-Mapping mode
5.2 years ago by Rob 6.5k
2
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1
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6.6k
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Comment: C: How to change cellranger multimapping algorithm
5.2 years ago by Rob 6.5k
3
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0
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2.9k
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Answer: C: RNA-Seq:How to know RNA-seq data is Strand-Specific or not based on only fastq
updated 5.3 years ago by 81k • written 5.3 years ago by 6.5k
5
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2
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6.6k
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Answer: A: How to change cellranger multimapping algorithm
5.3 years ago by Rob 6.5k
4
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2
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2.5k
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Answer: A: Average Insert Size When Using Transcript Quantification Tools Such as Salmon?
5.5 years ago by Rob 6.5k
1
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2
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3.6k
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Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
1
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1
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3.6k
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Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
1
vote
1
reply
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
0
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2
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3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
0
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1
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3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
1
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1
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4.3k
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Comment: C: Salmon (error: SAM file and fasta file have different transcript length)
5.5 years ago by Rob 6.5k
1
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2
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4.3k
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Comment: C: Salmon (error: SAM file and fasta file have different transcript length)
5.5 years ago by Rob 6.5k
1
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1
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4.3k
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Comment: C: Salmon (error: SAM file and fasta file have different transcript length)
5.5 years ago by Rob 6.5k
1
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1
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4.3k
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Comment: C: Salmon (error: SAM file and fasta file have different transcript length)
5.5 years ago by Rob 6.5k
0
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1
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4.3k
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Answer: A: Salmon (error: SAM file and fasta file have different transcript length)
5.5 years ago by Rob 6.5k
1
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1
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2.6k
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Comment: C: Interpretation of Salmon quat.sf result
5.6 years ago by Rob 6.5k
6
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0
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3.7k
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Answer: A: RNA-seq: differentially expressed genes without genome reference
updated 5.6 years ago by 43k • written 8.2 years ago by 6.5k
0
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1
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5.4k
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Comment: C: Poor correlation of read count values from STAR and Kallisto
updated 5.6 years ago by 43k • written 8.2 years ago by 6.5k
0
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1
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3.8k
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Comment: C: Maximum size limit for indexing genome with bowtie2 with large index option
5.6 years ago by Rob 6.5k
0
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1
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3.8k
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Comment: C: Maximum size limit for indexing genome with bowtie2 with large index option
5.6 years ago by Rob 6.5k
4
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1
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1.6k
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Answer: A: Will Kallisto or Salmon perform streaming alignment from the Sequence Read Archi
5.6 years ago by Rob 6.5k
1
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0
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4.2k
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Comment: C: Salmon Quantification for RNA-seq Read Pairs with Different Lengths
5.6 years ago by Rob 6.5k
4
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1
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4.2k
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Answer: A: Salmon Quantification for RNA-seq Read Pairs with Different Lengths
5.6 years ago by Rob 6.5k
0
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0
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4.2k
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Comment: C: Salmon quantification vs HTSeq count quantification
5.7 years ago by Rob 6.5k
5
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1
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4.2k
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Answer: A: Salmon quantification vs HTSeq count quantification
5.7 years ago by Rob 6.5k
0
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0
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1.2k
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Comment: C: Salmon Algorithm Binary Search
5.7 years ago by Rob 6.5k
3
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1
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1.2k
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Answer: A: Salmon Algorithm Binary Search
5.7 years ago by Rob 6.5k
2
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1
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3.0k
views
Comment: C: Stranded RNA-seq data visualization in UCSC
5.7 years ago by Rob 6.5k
3
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1
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3.0k
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Answer: A: Stranded RNA-seq data visualization in UCSC
5.7 years ago by Rob 6.5k
0
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0
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1.5k
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Comment: C: Conflict of abundances on different taxonomic levels using centrifuge
5.7 years ago by Rob 6.5k
2
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1
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1.5k
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Answer: A: Conflict of abundances on different taxonomic levels using centrifuge
5.7 years ago by Rob 6.5k
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0
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8.3k
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Comment: C: Mapping vs Quasi-Mapping
5.7 years ago by Rob 6.5k
3
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0
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8.3k
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Comment: C: Mapping vs Quasi-Mapping
5.7 years ago by Rob 6.5k
0
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0
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1.0k
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Answer: A: Bayesian algorithm / HISAT & STAR
5.7 years ago by Rob 6.5k
7
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1
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8.3k
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Comment: C: Mapping vs Quasi-Mapping
5.7 years ago by Rob 6.5k
16
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1
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8.3k
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Answer: C: Mapping vs Quasi-Mapping
5.7 years ago by Rob 6.5k
3
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1
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5.0k
views
Answer: A: Big differences between mappings computed by Salmon and quantification
5.8 years ago by Rob 6.5k
343 results • Page 4 of 7
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