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14
votes
2
replies
8.8k
views
Comment: C: How does salmon deal with decoy?
3.6 years ago by Rob 6.5k
0
votes
1
reply
1.5k
views
Comment: C: Transcripts with no read support
3.6 years ago by Rob 6.5k
0
votes
2
replies
1.5k
views
Comment: C: Transcripts with no read support
3.6 years ago by Rob 6.5k
0
votes
0
replies
1.5k
views
Comment: C: Salmon or Kallisto without reference transcriptome - possible?
3.7 years ago by Rob 6.5k
1
vote
1
reply
1.9k
views
Comment: C: Salmon building index and quantifying mapping questions
3.8 years ago by Rob 6.5k
0
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0
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1.9k
views
Comment: C: Salmon building index and quantifying mapping questions
3.8 years ago by Rob 6.5k
1
vote
1
reply
3.0k
views
Comment: C: minimap2: aligning multiple regions to a read in a fastq
3.8 years ago by Rob 6.5k
0
votes
1
reply
4.2k
views
Comment: C: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
3.9 years ago by Rob 6.5k
0
votes
0
replies
1.1k
views
Comment: C: Tool for computing all solutions to the small parsimony problem
3.9 years ago by Rob 6.5k
2
votes
0
replies
2.0k
views
Comment: C: having trouble running Salmon in anaconda prompt
4.0 years ago by Rob 6.5k
0
votes
0
replies
2.0k
views
Comment: C: having trouble running Salmon in anaconda prompt
4.0 years ago by Rob 6.5k
1
vote
1
reply
2.2k
views
Comment: C: hisat2 salmon alignment error
4.1 years ago by Rob 6.5k
0
votes
0
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973
views
Comment: C: parameters mapping in salmon software
4.1 years ago by Rob 6.5k
0
votes
0
replies
973
views
Comment: C: parameters mapping in salmon software
4.1 years ago by Rob 6.5k
1
vote
2
replies
1.6k
views
Comment: C: can salmon distinguish similar transcript?
4.1 years ago by Rob 6.5k
2
votes
2
replies
4.7k
views
Comment: C: Sailfish TPM normalization: does it take into account the size the library?
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
1
vote
1
reply
2.9k
views
Comment: C: Can k-tuple(k-mer/k-word) methods apply to reads generated from next-generation
updated 4.3 years ago by 43k • written 9.9 years ago by 6.5k
2
votes
0
replies
5.7k
views
Comment: C: confusion in the DeBruijn Graph
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
1
vote
1
reply
5.7k
views
Comment: C: confusion in the DeBruijn Graph
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
2
votes
0
replies
5.4k
views
Comment: C: align shortreads using R
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
1
vote
0
replies
5.7k
views
Comment: C: confusion in the DeBruijn Graph
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
1
vote
0
replies
5.7k
views
Comment: C: confusion in the DeBruijn Graph
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
0
votes
1
reply
7.0k
views
Comment: C: TPM or FPKM as input values for PCA and WGCNA?
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
3
votes
1
reply
4.4k
views
Comment: C: best workflow for RNA data analysis without replications
updated 4.3 years ago by 43k • written 8.3 years ago by 6.5k
0
votes
1
reply
1.2k
views
Comment: C: Issue with index creation in RapMap
4.3 years ago by Rob 6.5k
0
votes
0
replies
3.5k
views
Comment: C: Microarray and RNA-seq different result
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
votes
1
reply
21k
views
Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
votes
0
replies
3.1k
views
Comment: C: finding reads from fastq files corresponds to particular transcript from fasta f
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
votes
0
replies
4.1k
views
Comment: C: Salmon warning detected suspicious pair
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
votes
1
reply
4.1k
views
Comment: C: Salmon warning detected suspicious pair
updated 4.4 years ago by 43k • written 8.5 years ago by 6.5k
0
votes
0
replies
18k
views
Comment: C: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
updated 4.4 years ago by 43k • written 8.5 years ago by 6.5k
0
votes
0
replies
8.4k
views
Comment: Comment: Salmon: A fast and versatile new tool for RNA-seq quantification
updated 2.1 years ago by 43k • written 8.5 years ago by 6.5k
0
votes
0
replies
4.0k
views
Comment: C: Salmon error message
4.5 years ago by Rob 6.5k
0
votes
0
replies
17k
views
Comment: C: Fragment Size: TLEN vs. isize
updated 4.5 years ago by 43k • written 9.8 years ago by 6.5k
0
votes
0
replies
5.4k
views
Comment: C: Python Program to read .fasta file to .txt file
4.6 years ago by Rob 6.5k
2
votes
1
reply
3.1k
views
Comment: C: Merging the output of salmon for RNA-seq counting with paired-end and single-end
4.7 years ago by Rob 6.5k
0
votes
1
reply
1.2k
views
Comment: C: inconsistent results of rsem quantification
4.7 years ago by Rob 6.5k
0
votes
1
reply
5.7k
views
Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
0
votes
1
reply
5.7k
views
Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
1
vote
1
reply
5.7k
views
Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
1
vote
1
reply
5.7k
views
Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
2
votes
1
reply
5.7k
views
Comment: C: Understanding salmon codes
5.1 years ago by Rob 6.5k
0
votes
1
reply
7.4k
views
Comment: C: Salmon transcriptome generation
5.1 years ago by Rob 6.5k
0
votes
0
replies
4.4k
views
Comment: C: Salmon Counts differ in Alignment and Quasi-Mapping mode
5.2 years ago by Rob 6.5k
2
votes
1
reply
6.6k
views
Comment: C: How to change cellranger multimapping algorithm
5.2 years ago by Rob 6.5k
1
vote
2
replies
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
1
vote
1
reply
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
1
vote
1
reply
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
0
votes
2
replies
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
0
votes
1
reply
3.6k
views
Comment: C: best pipeline to get gene and transcript counts
5.5 years ago by Rob 6.5k
204 results • Page 2 of 5
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