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2.6k
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Comment: C: How is the FM-index built for multiple entries of a fasta file?
5.1 years ago by Rob 5.2k
0
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1
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1.3k
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Comment: C: More specifics on Jellyfish -C methodology.
5.1 years ago by Rob 5.2k
2
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1
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1.5k
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Comment: C: Differences between Counts and FPKMS
5.2 years ago by Rob 5.2k
0
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1
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1.5k
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Comment: C: Differences between Counts and FPKMS
5.2 years ago by Rob 5.2k
1
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0
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1.5k
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Comment: C: Differences between Counts and FPKMS
5.2 years ago by Rob 5.2k
0
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1
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1.1k
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Comment: C: Any possible to run cuffdiff without cuffqunt?
5.3 years ago by Rob 5.2k
0
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1
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4.5k
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Comment: C: STAR-RSEM RNA-seq pipeline is deterministic?
5.6 years ago by Rob 5.2k
3
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1
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4.5k
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Comment: C: STAR-RSEM RNA-seq pipeline is deterministic?
5.6 years ago by Rob 5.2k
0
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0
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4.1k
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Comment: C: Salmon libtype - Does it matter?
5.7 years ago by Rob 5.2k
2
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0
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4.1k
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Comment: C: Does TPM account for fragments?
5.7 years ago by Rob 5.2k
1
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0
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4.1k
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Comment: C: Does TPM account for fragments?
5.8 years ago by Rob 5.2k
1
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1
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4.1k
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Comment: C: Does TPM account for fragments?
5.8 years ago by Rob 5.2k
1
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1
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4.1k
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Comment: C: Does TPM account for fragments?
5.8 years ago by Rob 5.2k
0
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1
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6.6k
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Comment: C: Salmon: Optimal k-mer size (for indexing) for RNA-seq data alignment using refer
5.8 years ago by Rob 5.2k
1
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1
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6.6k
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Comment: C: Optimal k-mer size for RNA-seq data alignment using reference genome for indexin
5.8 years ago by Rob 5.2k
0
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1
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2.8k
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Comment: C: Salmon warning detected suspicious pair
5.9 years ago by Rob 5.2k
0
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0
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19k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
5.9 years ago by Rob 5.2k
2
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1
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3.6k
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Comment: C: RNA-Seq for DE analysis
6.1 years ago by Rob 5.2k
1
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1
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2.1k
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Comment: C: Error in Transcript to gene level estimation using "Genesum" package
6.1 years ago by Rob 5.2k
1
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0
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19k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
6.1 years ago by Rob 5.2k
0
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0
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2.9k
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Comment: C: RNA-seq mapper that allows variability and handles multi-mapping?
6.1 years ago by Rob 5.2k
1
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0
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2.9k
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Comment: C: RNA-seq mapper that allows variability and handles multi-mapping?
6.1 years ago by Rob 5.2k
0
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0
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2.2k
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Comment: C: Getting sequence id from k-mers using jellyfish
6.1 years ago by Rob 5.2k
0
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0
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4.0k
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Comment: C: Merging more than 2 csv files in r studio?
6.2 years ago by Rob 5.2k
0
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0
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5.8k
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Comment: C: HISAT2 end-to-end and --no-spliced-alignment mode returns gapped alignments
6.2 years ago by Rob 5.2k
8
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1
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1.8k
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Comment: C: C++ tools are hard to install for biologist, why the community stick on it?
6.2 years ago by Rob 5.2k
2
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0
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5.8k
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Comment: C: HISAT2 end-to-end and --no-spliced-alignment mode returns gapped alignments
6.2 years ago by Rob 5.2k
0
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2
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4.2k
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Comment: C: Correlation of read count values from STAR and Kallisto
6.2 years ago by Rob 5.2k
2
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1
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4.2k
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Comment: C: Correlation of read count values from STAR and Kallisto
6.2 years ago by Rob 5.2k
1
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1
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4.2k
views
Comment: C: Poor correlation of read count values from STAR and Kallisto
6.2 years ago by Rob 5.2k
0
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0
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3.9k
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Comment: Comment: Finding isoform expression in RNA-Seq
updated 5 weeks ago by 36k • written 6.6 years ago by 5.2k
0
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1
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3.9k
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Comment: Comment: Finding isoform expression in RNA-Seq
updated 5 weeks ago by 36k • written 6.6 years ago by 5.2k
1
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1
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5.7k
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Comment: C: Bowtie2 or RSEM (with Bowtie2) alignment of PE reads with reference transcriptom
6.6 years ago by Rob 5.2k
0
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1
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7.7k
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Comment: Comment: Salmon: A fast and versatile new tool for RNA-seq quantification
updated 9 weeks ago by 36k • written 6.6 years ago by 5.2k
0
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0
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5.8k
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Comment: C: Jellyfish -C option explanation
6.8 years ago by Rob 5.2k
0
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1
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5.8k
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Comment: C: Jellyfish -C option explanation
6.8 years ago by Rob 5.2k
0
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1
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2.4k
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Comment: C: GATB de Bruijn graph
6.8 years ago by Rob 5.2k
0
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1
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2.4k
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Comment: C: GATB de Bruijn graph
6.8 years ago by Rob 5.2k
0
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1
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2.4k
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Comment: C: GATB de Bruijn graph
6.9 years ago by Rob 5.2k
0
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2
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2.4k
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Comment: C: GATB de Bruijn graph
6.9 years ago by Rob 5.2k
1
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1
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7.3k
views
Comment: C: Using rna-seq, why map reads to the genome but calculate gene expression by alig
6.9 years ago by Rob 5.2k
0
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0
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7.3k
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Comment: C: Using rna-seq, why map reads to the genome but calculate gene expression by alig
6.9 years ago by Rob 5.2k
1
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0
replies
31k
views
Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
6.9 years ago by Rob 5.2k
1
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1
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31k
views
Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
6.9 years ago by Rob 5.2k
1
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2
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31k
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Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
6.9 years ago by Rob 5.2k
0
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0
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2.8k
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Comment: C: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
6.9 years ago by Rob 5.2k
0
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1
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2.8k
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Comment: C: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
6.9 years ago by Rob 5.2k
0
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1
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2.8k
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Comment: C: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
6.9 years ago by Rob 5.2k
0
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2
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2.8k
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Comment: C: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
6.9 years ago by Rob 5.2k
1
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1
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31k
views
Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
7.0 years ago by Rob 5.2k
171 results • Page 3 of 4
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