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Comment: Comment: Nextflow: absolute file path gets concatenated?
19 months ago by Eliveri ▴ 350
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822
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Comment: Comment: Identify similarly mapped reads in BAM/SAM?
21 months ago by Eliveri ▴ 350
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2.6k
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Comment: Comment: Nextflow: No space left on device, process using output directory as input?
2.0 years ago by Eliveri ▴ 350
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2.6k
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Comment: Comment: Nextflow: No space left on device, process using output directory as input?
2.0 years ago by Eliveri ▴ 350
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1.8k
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Comment: Comment: How do you download from CyVerse using FTP or wget?
2.0 years ago by Eliveri ▴ 350
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2.0k
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Comment: Comment: Nextflow Gatk DepthOfCoverage: Failure working with the tmp directory
2.0 years ago by Eliveri ▴ 350
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2
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1.8k
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Comment: Comment: How do you download from CyVerse using FTP or wget?
2.0 years ago by Eliveri ▴ 350
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1.2k
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Comment: Comment: Rscript Nextflow Error: unable to load shared object
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Samtools equivalent of "CleanSam" Picard GATK?
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Samtools equivalent of "CleanSam" Picard GATK?
2.0 years ago by Eliveri ▴ 350
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1.3k
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Comment: Comment: SamSort gatk invalid argument / no space left on disk
2.0 years ago by Eliveri ▴ 350
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2.1k
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Comment: Comment: Running Rscript in Nextflow (Rmd file not found)
2.0 years ago by Eliveri ▴ 350
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2.4k
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Comment: Comment: How to select or subset process outputs in Nextflow DSL2?
2.0 years ago by Eliveri ▴ 350
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1.9k
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Comment: Comment: Nextflow output from different processes mixed up as input in later processes
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Allocating memory for samtools sort in nextflow?
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Allocating memory for samtools sort in nextflow?
2.0 years ago by Eliveri ▴ 350
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2.5k
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Comment: Comment: Filter out Bam not overlapping with Bed File (keeping a read and its mate)?
2.0 years ago by Eliveri ▴ 350
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2.5k
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Comment: Comment: Filter out Bam not overlapping with Bed File (keeping a read and its mate)?
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Converting Bam file to Fasta (Zipped)
2.0 years ago by Eliveri ▴ 350
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1.7k
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Comment: Comment: Converting Bam file to Fasta (Zipped)
2.0 years ago by Eliveri ▴ 350
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1
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2.0k
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Comment: Comment: Nextflow Gatk DepthOfCoverage: Failure working with the tmp directory
2.0 years ago by Eliveri ▴ 350
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2.3k
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Comment: Comment: Nextflow Rmd render script cannot find input files?
2.0 years ago by Eliveri ▴ 350
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2.0k
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Comment: Comment: Fetching UniProt ID Mapping results as TSV using Python?
2.0 years ago by Eliveri ▴ 350
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1.8k
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Comment: Comment: Nextflow workflow errors when run from Scratch dir?
2.0 years ago by Eliveri ▴ 350
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1.8k
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Comment: Comment: Nextflow workflow errors when run from Scratch dir?
2.0 years ago by Eliveri ▴ 350
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2.3k
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Comment: Comment: Nextflow Rmd render script cannot find input files?
2.0 years ago by Eliveri ▴ 350
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0
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2.1k
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Comment: Comment: Nextflow: [E::bwa_idx_load_from_disk] fail to locate the index files
2.0 years ago by Eliveri ▴ 350
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2.1k
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Comment: Comment: Nextflow SGE: [E::bwa_idx_load_from_disk] fail to locate the index files
2.1 years ago by Eliveri ▴ 350
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4.0k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.1 years ago by Eliveri ▴ 350
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4.0k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.1 years ago by Eliveri ▴ 350
1
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1
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4.0k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.1 years ago by Eliveri ▴ 350
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1
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4.0k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.1 years ago by Eliveri ▴ 350
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1
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4.0k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.1 years ago by Eliveri ▴ 350
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1
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1.7k
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Comment: Comment: Nextflow R Markdown render output to different directory: Missing output file(s
2.2 years ago by Eliveri ▴ 350
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2.1k
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Comment: Comment: Running Rscript in Nextflow (Rmd file not found)
2.3 years ago by Eliveri ▴ 350
1
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0
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1.9k
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Comment: Comment: Nextflow output from different processes mixed up as input in later processes
2.3 years ago by Eliveri ▴ 350
0
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0
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1.8k
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Comment: Comment: BWA alignment failing after adding nextflow.config file?
2.4 years ago by Eliveri ▴ 350
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0
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991
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Comment: Comment: Match header (list) to sequence in fasta file quickly?
2.4 years ago by Eliveri ▴ 350
1
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1
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2.5k
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Comment: Comment: Filter out Bam not overlapping with Bed File (keeping a read and its mate)?
2.4 years ago by Eliveri ▴ 350
0
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0
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792
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Comment: Comment: Filter out Bam not overlapping with Bed File?
2.4 years ago by Eliveri ▴ 350
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