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How to put distinct colors to connection bridges in the Sankey plot ?
R Python Sankey
updated 7 months ago by 12k • written 7 months ago by ▴ 40
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376
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Issues with FPKM Calculation in RNA-seq Analysis (Apodemus agrarius)
FPKM. Cufflinks
updated 8 months ago by 16k • written 8 months ago by ▴ 40
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0
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420
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Issue with Taxonomy Assignment Using Kraken and Custom Database (BOLD, Nemabiome) in QIIME2 shotgun
BOLD Qiime2 Taxonomy Assignment Kraken2
9 months ago by ohtang7 ▴ 40
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0
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373
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For RNAseq GSA analysis with unique rodent species
GOenrichment RNAseq GSA hypergeometrictest Apodemus
11 months ago by ohtang7 ▴ 40
2
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4
replies
1.3k
views
Has anyone tried absence or presence heatmap ? (Or suggestion)
R absence Heatmap grouping
updated 11 months ago by ▴ 130 • written 11 months ago by ▴ 40
7
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5
replies
1.3k
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STAR alignment for RNA seq - trouble occurred
Alignment STAR RNA-seq gtf
11 months ago by ohtang7 ▴ 40
1
vote
3
replies
1.7k
views
Is there any way to modify this pie chart ?
pie ggplot R chart
updated 18 months ago by 154k • written 18 months ago by ▴ 40
0
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0
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440
views
The concept of co-occurrence network structure
co-occurence microbiome network
19 months ago by ohtang7 ▴ 40
0
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1
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809
views
Network Analysis of Microbiome Data: MicrobiomeAnalyst vs. Cytoscape
MicrobiomeAnalyst
21 months ago by ohtang7 ▴ 40
2
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4
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1.4k
views
How Can I move the scattered dots more closer into the center of box ?
R Boxplots geom_jitter
23 months ago by ohtang7 ▴ 40
6
votes
3
replies
1.5k
views
How can I adjust Y-axis scale when making relative abundance box plot ?
statistics box-plot R scale_adjustment logarithm
updated 24 months ago by ▴ 940 • written 24 months ago by ▴ 40
0
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4
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1.5k
views
Making multiple box plots with relative abundance in R
R Boxplots
24 months ago by ohtang7 ▴ 40
0
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1
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871
views
chi-square test using vectors - and trying to for loop
R chi-square
updated 2.1 years ago by 45k • written 2.1 years ago by ▴ 40
0
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0
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622
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How can I obtain the significantly different taxa data from this Aldex plot ? (Using R)
taxa test Aldex2 of abundance Relative R
2.7 years ago by ohtang7 ▴ 40
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0
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801
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How to export the result contents (analyzed part only) of clr function to the CSV file ? (The microbiota data) in R Aldex2 package
Aldex2 ASV R
updated 2.7 years ago by 45k • written 2.7 years ago by ▴ 40
1
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2
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1.5k
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What's the reason and how to fix - Regression model summary - variable name is combined with a category character in R
interpretation Model GLM Regression Summary LM
2.7 years ago by ohtang7 ▴ 40
1
vote
3
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2.7k
views
How can I change my default python version (from upper to lower) in Ubuntu OS using virtual machine ?
Qiime2 Linux Machine Virtual Python
updated 2.9 years ago by 154k • written 3.1 years ago by ▴ 40
8
votes
6
replies
4.1k
views
Using Generalized Linear Model in Microbial structure comparison
metabarcoding GLM microbiota GLMM
2.9 years ago by ohtang7 ▴ 40
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