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Posts by amirsh6
... Any idea when/ if Biopython SearchIO will become non-experimental in upcoming Biopython releases? I love using it but always slightly worried about reproducibility. ...
... I am in the process of annotating a non-vertebrate genome assembly with TEs. I started with RepeatModeler to generate a library. Then I searched my assembly using RepeatMasker, once with the new library and again with -species eukaryota. The first (-lib) search has many more matches than the second, ...
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