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1
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2
replies
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Strange issue retrieving sequences from a local BLAST database made using a Uniprot proteome
blast protein sequence fasta uniprot
updated 7 months ago by 118k • written 7 months ago by ▴ 830
0
votes
0
replies
472
views
Bulk downloads from CNGB
data download repository CNGB
2.1 years ago by sviatoslav.kendall ▴ 830
4
votes
4
replies
2.2k
views
How can I run a Biopython qblast search targeting a specific set of organisms?
BLAST Biopython
updated 2.2 years ago by ▴ 380 • written 2.2 years ago by ▴ 830
9
votes
12
replies
2.4k
views
8 follow
Which Driver-Gene Detecting Software Supports hg38?
2020+ MutSig2CV MuSiC
updated 9 months ago by ▴ 270 • written 3.2 years ago by ▴ 830
1
vote
1
reply
980
views
Can splice-site mutations be treated as gene knock-outs?
SNP sequencing
updated 4.4 years ago by 46k • written 4.4 years ago by ▴ 830
1
vote
1
reply
2.7k
views
In FACETS, what does the mafR value represent?
CNV
updated 5.1 years ago by ▴ 910 • written 6.0 years ago by ▴ 830
0
votes
0
replies
2.2k
views
Question about Copy-Number Data produced using Sequenza
R copy-number Sequenza
updated 5.2 years ago by 20 • written 5.3 years ago by ▴ 830
0
votes
0
replies
2.1k
views
Filter out Non-Diploid segments in FACETS data
sequencing R FACETS CNV
5.3 years ago by sviatoslav.kendall ▴ 830
0
votes
0
replies
1.4k
views
SNPEFF Sequence Ontology Terms that are equivalent to a Loss of Function
snp sequencing
updated 5.8 years ago by 20 • written 6.0 years ago by ▴ 830
0
votes
0
replies
2.0k
views
DNA Methylation: how do Percent Methylation values compare to PMR?
R sequencing Methylation
6.1 years ago by sviatoslav.kendall ▴ 830
0
votes
0
replies
667
views
Tool for getting every CHROM_POS_REF_ALT that will produce specific point mutation
genome gene
6.3 years ago by sviatoslav.kendall ▴ 830
13
votes
13
replies
4.9k
views
How Successful are new Bioinformatics Software Companies?
business software SAAS
updated 6.3 years ago by ★ 2.0k • written 6.3 years ago by ▴ 830
2
votes
2
replies
3.0k
views
Tools to display mutations in a protein's structure
protein sequence
updated 6.4 years ago by ★ 3.1k • written 6.4 years ago by ▴ 830
8
votes
6
replies
2.5k
views
How can a gene exist on three different chromosomes!?!?
gene genome
updated 10 days ago by 36k • written 6.5 years ago by ▴ 830
4
votes
2
replies
1.6k
views
Phylogenic Analyses using non-sequential sequences
sequence
updated 18 days ago by 36k • written 6.6 years ago by ▴ 830
6
votes
4
replies
2.3k
views
Trouble renaming output files after running PHYLIP programs from a BASH script
PHYLIP sequence software-error
updated 4 days ago by 36k • written 6.6 years ago by ▴ 830
1
vote
1
reply
1.8k
views
TCGA miRNA data - is this an appropriate approach?
TCGA RNA-Seq miRNA
updated 12 weeks ago by 36k • written 7.4 years ago by ▴ 830
1
vote
1
reply
2.0k
views
Where can I find more Cancer Datasets for Validation purposes
TCGA ICGC
updated 3 months ago by 36k • written 7.5 years ago by ▴ 830
0
votes
0
replies
1.7k
views
Tool for finding inhibitory factors for a list of genes?
gene online-tools transcription-factors
updated 7.5 years ago by 20 • written 7.7 years ago by ▴ 830
2
votes
1
reply
3.2k
views
TCGA data looks different on ICGC
sequencing genome
updated 5 months ago by 36k • written 7.7 years ago by ▴ 830
22
votes
17
replies
3.0k
views
10 follow
How can I learn cluster computing?
genome next-gen RNA-Seq
updated 5 months ago by 36k • written 7.7 years ago by ▴ 830
4
votes
5
replies
3.4k
views
What is appropriate coverage/quality filter for GATK for germline variants?
sequencing Coverage genome GATK
updated 5 months ago by 36k • written 7.7 years ago by ▴ 830
6
votes
8
replies
5.4k
views
6 follow
What kind of distribution to you expect to see for RNA-Seq expression levels?
RNA-Seq
updated 8 months ago by 36k • written 8.1 years ago by ▴ 830
2
votes
2
replies
1.9k
views
Tool for visualizing proteins based on amino-acid structure?
sequence gene proteomics
updated 9 months ago by 36k • written 8.2 years ago by ▴ 830
14
votes
8
replies
3.1k
views
Physical Lab Notebook for Computational Work
Lab Record Notebook R Keeping
updated 9 months ago by 36k • written 8.2 years ago by ▴ 830
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