User: harris

gravatar for harris
harris0
Reputation:
0
Status:
New User
Last seen:
2 weeks, 2 days ago
Joined:
6 years, 2 months ago
Email:
h*****@uthscsa.edu

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by harris

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
88
views
1
answers
Comment: C: loading 10XGenomic sc-rna data into bigSCale2 for Gene regulatory network analys
... thanks so much Jared, really appreciate. steve ...
written 16 days ago by harris0
0
votes
1
answer
88
views
1
answer
loading 10XGenomic sc-rna data into bigSCale2 for Gene regulatory network analysis
... Hi , has anyone in the community used bigSCale2 to load 10XGenomic sc-rna data(the matrix.mtx.gz, barcodes.tsv, and features.tsv.gz ) files into the R program bigSCale2. Trying to construct someGRN. I have used Monocle 3 that had a quick load method for loading. Not sure if bigSCale2 has a way to ma ...
R written 16 days ago by harris0 • updated 16 days ago by jared.andrews076.4k
0
votes
1
answer
1.8k
views
1
answers
Comment: C: Finding intergenic transcripts from a bedgraph file or bam file
... Thanks so much Sukhdeep, will give your thoughts a try. steve ...
written 6.2 years ago by harris0 • updated 6.2 years ago by Sukhdeep Singh10k
0
votes
1
answer
1.8k
views
1
answer
Finding intergenic transcripts from a bedgraph file or bam file
... Hi, I have  a series of bedgraph files made from .bam files using bedtools-2.17.0/genomeCoverageBed -ibam my.sorted.bam -bg > my.sorted.bg command. I can load into UCSC browser and works fine. Now my question is, I did paired end strand specific libraries and analysis.  From my .bg files I want t ...
rna-seq written 6.2 years ago by harris0 • updated 6.2 years ago by Sukhdeep Singh10k

Latest awards to harris

Popular Question 6.2 years ago, created a question with more than 1,000 views. For Finding intergenic transcripts from a bedgraph file or bam file

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1393 users visited in the last hour